| Chain sequence(s) |
A: CKGKGAKCSRLMYDCCTGSCRSGKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.1091 | |
| 2 | K | A | -1.8804 | |
| 3 | G | A | -2.2375 | |
| 4 | K | A | -3.3885 | |
| 5 | G | A | -2.9098 | |
| 6 | A | A | -2.7044 | |
| 7 | K | A | -3.7807 | |
| 8 | C | A | -2.4280 | |
| 9 | S | A | -1.2511 | |
| 10 | R | A | -1.4982 | |
| 11 | L | A | 1.2104 | |
| 12 | M | A | 1.6501 | |
| 13 | Y | A | 1.5645 | |
| 14 | D | A | -0.4534 | |
| 15 | C | A | -1.1040 | |
| 16 | C | A | -0.1029 | |
| 17 | T | A | -0.4851 | |
| 18 | G | A | -1.1778 | |
| 19 | S | A | -1.3991 | |
| 20 | C | A | -2.0285 | |
| 21 | R | A | -3.3102 | |
| 22 | S | A | -2.1822 | |
| 23 | G | A | -2.6336 | |
| 24 | K | A | -3.8664 | |
| 25 | C | A | 0.0000 |