| Chain sequence(s) |
A: TKTTCPDGQRDRGGCSGPYSCGGDNCCAYAAASVYRGYSCKDTY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:27)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.9174 | |
| 2 | K | A | -1.5689 | |
| 3 | T | A | -1.2763 | |
| 4 | T | A | -0.8279 | |
| 5 | C | A | -1.4362 | |
| 6 | P | A | -1.3240 | |
| 7 | D | A | -2.0195 | |
| 8 | G | A | -1.0373 | |
| 9 | Q | A | -1.3564 | |
| 10 | R | A | -1.8150 | |
| 11 | D | A | -2.5156 | |
| 12 | R | A | -3.2432 | |
| 13 | G | A | -2.2123 | |
| 14 | G | A | -1.6308 | |
| 15 | C | A | -1.3956 | |
| 16 | S | A | -0.8403 | |
| 17 | G | A | -0.6017 | |
| 18 | P | A | 0.1020 | |
| 19 | Y | A | 0.7228 | |
| 20 | S | A | -0.1906 | |
| 21 | C | A | -0.7013 | |
| 22 | G | A | -1.0203 | |
| 23 | G | A | -1.8884 | |
| 24 | D | A | -3.0274 | |
| 25 | N | A | -3.0541 | |
| 26 | C | A | 0.0000 | |
| 27 | C | A | 0.0000 | |
| 28 | A | A | -0.2466 | |
| 29 | Y | A | 0.4961 | |
| 30 | A | A | 0.8220 | |
| 31 | A | A | 1.0133 | |
| 32 | A | A | 0.3475 | |
| 33 | S | A | 0.5835 | |
| 34 | V | A | 1.5060 | |
| 35 | Y | A | 0.3709 | |
| 36 | R | A | -1.4696 | |
| 37 | G | A | -1.1114 | |
| 38 | Y | A | -0.3254 | |
| 39 | S | A | -0.8907 | |
| 40 | C | A | -1.5340 | |
| 41 | K | A | -2.4329 | |
| 42 | D | A | -1.7307 | |
| 43 | T | A | -1.0387 | |
| 44 | Y | A | 0.3222 |