Project name: query_structure

Status: done

Started: 2026-03-16 23:14:17
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Chain sequence(s) A: EVQLQASGGGLVEPGGSLRLSCAVSGINFNINHWGWYRQAPGKQREWVATIAIGGATDYADSLKGRFTISRDNMKNTVYLQMNSLRPEDTAVYYCNGVGSKWSVRWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:07)
Show buried residues

Minimal score value
-3.209
Maximal score value
1.6188
Average score
-0.7774
Total score value
-89.4046

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.6791
2 V A -0.9068
3 Q A -1.4299
4 L A 0.0000
5 Q A -1.5225
6 A A 0.0000
7 S A -1.1935
8 G A -1.0790
9 G A -0.7468
10 G A -0.0242
11 L A 0.8382
12 V A 0.0000
13 E A -2.1400
14 P A -2.2257
15 G A -1.8299
16 G A -1.3105
17 S A -1.4896
18 L A -1.0942
19 R A -2.0835
20 L A 0.0000
21 S A -0.8005
22 C A 0.0000
23 A A -0.9314
24 V A -0.7577
25 S A -0.8147
26 G A -0.3805
27 I A 0.6830
28 N A -0.7895
29 F A -0.7964
30 N A -1.5886
31 I A 0.0000
32 N A -0.9605
33 H A -0.3199
34 W A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A 0.0959
38 R A 0.0000
39 Q A -1.5779
40 A A -1.6838
41 P A -1.2114
42 G A -1.6973
43 K A -2.6923
44 Q A -2.6069
45 R A -1.9573
46 E A -1.0741
47 W A -0.1664
48 V A 0.0000
49 A A 0.0000
50 T A -0.5911
51 I A 0.0000
52 A A -0.1452
53 I A 0.3375
54 G A -0.2271
55 G A -0.4462
56 A A -0.3725
57 T A -0.8113
58 D A -2.0065
59 Y A -1.6701
60 A A -1.6049
61 D A -2.6269
62 S A -1.6713
63 L A 0.0000
64 K A -2.8678
65 G A -1.8153
66 R A -1.4325
67 F A 0.0000
68 T A -1.0691
69 I A 0.0000
70 S A -0.5249
71 R A -0.8571
72 D A -1.2164
73 N A -1.6880
74 M A -0.6415
75 K A -1.9544
76 N A -1.8331
77 T A 0.0000
78 V A 0.0000
79 Y A -0.5445
80 L A 0.0000
81 Q A -1.2110
82 M A 0.0000
83 N A -1.5683
84 S A -1.5433
85 L A 0.0000
86 R A -3.2090
87 P A -2.4058
88 E A -2.5901
89 D A 0.0000
90 T A -1.0515
91 A A 0.0000
92 V A -0.3165
93 Y A 0.0000
94 Y A -0.3239
95 C A 0.0000
96 N A 0.0000
97 G A 0.0000
98 V A 0.2143
99 G A 0.0000
100 S A -0.8882
101 K A -1.0154
102 W A 0.5561
103 S A 0.5004
104 V A 1.6188
105 R A 0.6829
106 W A 0.1749
107 G A -0.9453
108 Q A -1.4258
109 G A -0.9018
110 T A -1.0000
111 Q A -0.9292
112 V A 0.0000
113 T A -0.5016
114 V A 0.0000
115 S A -1.0999
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Laboratory of Theory of Biopolymers 2018