Project name: 773f30ef1feac2a

Status: done

Started: 2026-06-27 14:36:39
Settings
Chain sequence(s) A: RADARADARADARADA
C: RADARADARADARADA
B: RADARADARADARADA
E: RADARADARADARADA
D: RADARADARADARADA
G: RADARADARADARADA
F: RADARADARADARADA
I: RADARADARADARADA
H: RADARADARADARADA
K: RADARADARADARADA
J: RADARADARADARADA
L: RADARADARADARADA
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:40)
Show buried residues

Minimal score value
-3.4254
Maximal score value
0.0
Average score
-2.0026
Total score value
-384.5014

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -2.6203
2 A A -1.9373
3 D A -2.9183
4 A A -1.9270
5 R A -3.0100
6 A A -2.0091
7 D A -2.9534
8 A A -1.9005
9 R A -2.9107
10 A A -1.9017
11 D A -3.0135
12 A A -2.0331
13 R A -3.3367
14 A A -2.3539
15 D A -2.9807
16 A A -1.2324
1 R B -3.3589
2 A B -2.4542
3 D B -2.7875
4 A B -1.8955
5 R B -2.5991
6 A B -1.6624
7 D B 0.0000
8 A B -1.5569
9 R B -2.4698
10 A B -1.6758
11 D B -2.1119
12 A B -1.4818
13 R B -2.4731
14 A B -1.8377
15 D B -1.8860
16 A B -0.8564
1 R C -2.4193
2 A C -1.3991
3 D C 0.0000
4 A C -0.6614
5 R C -1.4604
6 A C -0.8618
7 D C 0.0000
8 A C -1.0183
9 R C -1.5751
10 A C -1.3103
11 D C -1.6781
12 A C -1.2516
13 R C -2.2815
14 A C -1.6352
15 D C -2.0831
16 A C -0.9243
1 R D -2.7858
2 A D -1.6244
3 D D -2.0659
4 A D -1.0834
5 R D -1.7962
6 A D -0.9923
7 D D -1.4071
8 A D -0.8930
9 R D -1.3800
10 A D -1.2164
11 D D -1.4469
12 A D -1.1311
13 R D -2.0084
14 A D -1.4516
15 D D -1.9129
16 A D -0.8757
1 R E -3.3110
2 A E -2.3993
3 D E -2.7353
4 A E -2.0375
5 R E -3.1636
6 A E -1.9640
7 D E -2.3150
8 A E -1.7005
9 R E -2.5782
10 A E -1.8488
11 D E -2.4846
12 A E -1.9805
13 R E -3.1021
14 A E -2.2275
15 D E -2.1777
16 A E -0.9387
1 R F -2.7343
2 A F -2.0602
3 D F -3.1540
4 A F -2.0831
5 R F -3.1155
6 A F -2.0196
7 D F -3.0371
8 A F -1.9856
9 R F -3.1259
10 A F -2.1811
11 D F -3.2863
12 A F -2.1632
13 R F -3.3823
14 A F -2.3129
15 D F -2.9759
16 A F -1.2339
1 R G -2.6934
2 A G -2.0184
3 D G -3.0401
4 A G -2.0236
5 R G -3.1142
6 A G -2.0428
7 D G -3.1098
8 A G -2.0086
9 R G -3.0879
10 A G -2.0245
11 D G -2.9988
12 A G -1.9077
13 R G -3.0225
14 A G -2.0198
15 D G -2.6759
16 A G -1.0979
1 R H -2.6675
2 A H -1.7696
3 D H 0.0000
4 A H -1.5856
5 R H -2.6151
6 A H -1.7583
7 D H -2.3893
8 A H -1.8653
9 R H -2.8780
10 A H -1.9372
11 D H -2.4341
12 A H -1.6848
13 R H -2.8140
14 A H -2.0423
15 D H -2.0209
16 A H -0.9296
1 R I -2.5034
2 A I -1.3410
3 D I 0.0000
4 A I -0.9004
5 R I -1.8684
6 A I -1.2237
7 D I -2.0356
8 A I -1.1238
9 R I -1.7723
10 A I -0.9183
11 D I -1.3538
12 A I -0.7772
13 R I -1.8538
14 A I -1.3794
15 D I -1.8851
16 A I -0.8509
1 R J -2.9397
2 A J -1.7848
3 D J -1.5551
4 A J -0.6942
5 R J -1.1659
6 A J -0.7029
7 D J -1.2749
8 A J -1.1792
9 R J -2.1262
10 A J -1.3126
11 D J -1.8496
12 A J -1.0904
13 R J -2.1183
14 A J -1.4231
15 D J -1.7392
16 A J -0.6777
1 R K -3.4254
2 A K -2.3896
3 D K -2.4248
4 A K -1.4258
5 R K -1.9637
6 A K -1.4028
7 D K -2.1564
8 A K -2.0022
9 R K -3.2570
10 A K -2.1259
11 D K -2.6524
12 A K -2.0657
13 R K -3.2352
14 A K -2.2291
15 D K -2.4882
16 A K -0.8730
1 R L -2.9280
2 A L -2.2437
3 D L -3.0370
4 A L -1.8894
5 R L -2.8339
6 A L -1.8614
7 D L -2.9330
8 A L -2.1359
9 R L -3.3027
10 A L -2.1724
11 D L -3.2012
12 A L -2.1491
13 R L -3.3974
14 A L -2.2707
15 D L -2.7300
16 A L -1.0086
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Laboratory of Theory of Biopolymers 2018