| Chain sequence(s) |
A: RADARADARADARADA
C: RADARADARADARADA B: RADARADARADARADA E: RADARADARADARADA D: RADARADARADARADA G: RADARADARADARADA F: RADARADARADARADA I: RADARADARADARADA H: RADARADARADARADA K: RADARADARADARADA J: RADARADARADARADA L: RADARADARADARADA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:37)
[INFO] Main: Simulation completed successfully. (00:09:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.6203 | |
| 2 | A | A | -1.9373 | |
| 3 | D | A | -2.9183 | |
| 4 | A | A | -1.9270 | |
| 5 | R | A | -3.0100 | |
| 6 | A | A | -2.0091 | |
| 7 | D | A | -2.9534 | |
| 8 | A | A | -1.9005 | |
| 9 | R | A | -2.9107 | |
| 10 | A | A | -1.9017 | |
| 11 | D | A | -3.0135 | |
| 12 | A | A | -2.0331 | |
| 13 | R | A | -3.3367 | |
| 14 | A | A | -2.3539 | |
| 15 | D | A | -2.9807 | |
| 16 | A | A | -1.2324 | |
| 1 | R | B | -3.3589 | |
| 2 | A | B | -2.4542 | |
| 3 | D | B | -2.7875 | |
| 4 | A | B | -1.8955 | |
| 5 | R | B | -2.5991 | |
| 6 | A | B | -1.6624 | |
| 7 | D | B | 0.0000 | |
| 8 | A | B | -1.5569 | |
| 9 | R | B | -2.4698 | |
| 10 | A | B | -1.6758 | |
| 11 | D | B | -2.1119 | |
| 12 | A | B | -1.4818 | |
| 13 | R | B | -2.4731 | |
| 14 | A | B | -1.8377 | |
| 15 | D | B | -1.8860 | |
| 16 | A | B | -0.8564 | |
| 1 | R | C | -2.4193 | |
| 2 | A | C | -1.3991 | |
| 3 | D | C | 0.0000 | |
| 4 | A | C | -0.6614 | |
| 5 | R | C | -1.4604 | |
| 6 | A | C | -0.8618 | |
| 7 | D | C | 0.0000 | |
| 8 | A | C | -1.0183 | |
| 9 | R | C | -1.5751 | |
| 10 | A | C | -1.3103 | |
| 11 | D | C | -1.6781 | |
| 12 | A | C | -1.2516 | |
| 13 | R | C | -2.2815 | |
| 14 | A | C | -1.6352 | |
| 15 | D | C | -2.0831 | |
| 16 | A | C | -0.9243 | |
| 1 | R | D | -2.7858 | |
| 2 | A | D | -1.6244 | |
| 3 | D | D | -2.0659 | |
| 4 | A | D | -1.0834 | |
| 5 | R | D | -1.7962 | |
| 6 | A | D | -0.9923 | |
| 7 | D | D | -1.4071 | |
| 8 | A | D | -0.8930 | |
| 9 | R | D | -1.3800 | |
| 10 | A | D | -1.2164 | |
| 11 | D | D | -1.4469 | |
| 12 | A | D | -1.1311 | |
| 13 | R | D | -2.0084 | |
| 14 | A | D | -1.4516 | |
| 15 | D | D | -1.9129 | |
| 16 | A | D | -0.8757 | |
| 1 | R | E | -3.3110 | |
| 2 | A | E | -2.3993 | |
| 3 | D | E | -2.7353 | |
| 4 | A | E | -2.0375 | |
| 5 | R | E | -3.1636 | |
| 6 | A | E | -1.9640 | |
| 7 | D | E | -2.3150 | |
| 8 | A | E | -1.7005 | |
| 9 | R | E | -2.5782 | |
| 10 | A | E | -1.8488 | |
| 11 | D | E | -2.4846 | |
| 12 | A | E | -1.9805 | |
| 13 | R | E | -3.1021 | |
| 14 | A | E | -2.2275 | |
| 15 | D | E | -2.1777 | |
| 16 | A | E | -0.9387 | |
| 1 | R | F | -2.7343 | |
| 2 | A | F | -2.0602 | |
| 3 | D | F | -3.1540 | |
| 4 | A | F | -2.0831 | |
| 5 | R | F | -3.1155 | |
| 6 | A | F | -2.0196 | |
| 7 | D | F | -3.0371 | |
| 8 | A | F | -1.9856 | |
| 9 | R | F | -3.1259 | |
| 10 | A | F | -2.1811 | |
| 11 | D | F | -3.2863 | |
| 12 | A | F | -2.1632 | |
| 13 | R | F | -3.3823 | |
| 14 | A | F | -2.3129 | |
| 15 | D | F | -2.9759 | |
| 16 | A | F | -1.2339 | |
| 1 | R | G | -2.6934 | |
| 2 | A | G | -2.0184 | |
| 3 | D | G | -3.0401 | |
| 4 | A | G | -2.0236 | |
| 5 | R | G | -3.1142 | |
| 6 | A | G | -2.0428 | |
| 7 | D | G | -3.1098 | |
| 8 | A | G | -2.0086 | |
| 9 | R | G | -3.0879 | |
| 10 | A | G | -2.0245 | |
| 11 | D | G | -2.9988 | |
| 12 | A | G | -1.9077 | |
| 13 | R | G | -3.0225 | |
| 14 | A | G | -2.0198 | |
| 15 | D | G | -2.6759 | |
| 16 | A | G | -1.0979 | |
| 1 | R | H | -2.6675 | |
| 2 | A | H | -1.7696 | |
| 3 | D | H | 0.0000 | |
| 4 | A | H | -1.5856 | |
| 5 | R | H | -2.6151 | |
| 6 | A | H | -1.7583 | |
| 7 | D | H | -2.3893 | |
| 8 | A | H | -1.8653 | |
| 9 | R | H | -2.8780 | |
| 10 | A | H | -1.9372 | |
| 11 | D | H | -2.4341 | |
| 12 | A | H | -1.6848 | |
| 13 | R | H | -2.8140 | |
| 14 | A | H | -2.0423 | |
| 15 | D | H | -2.0209 | |
| 16 | A | H | -0.9296 | |
| 1 | R | I | -2.5034 | |
| 2 | A | I | -1.3410 | |
| 3 | D | I | 0.0000 | |
| 4 | A | I | -0.9004 | |
| 5 | R | I | -1.8684 | |
| 6 | A | I | -1.2237 | |
| 7 | D | I | -2.0356 | |
| 8 | A | I | -1.1238 | |
| 9 | R | I | -1.7723 | |
| 10 | A | I | -0.9183 | |
| 11 | D | I | -1.3538 | |
| 12 | A | I | -0.7772 | |
| 13 | R | I | -1.8538 | |
| 14 | A | I | -1.3794 | |
| 15 | D | I | -1.8851 | |
| 16 | A | I | -0.8509 | |
| 1 | R | J | -2.9397 | |
| 2 | A | J | -1.7848 | |
| 3 | D | J | -1.5551 | |
| 4 | A | J | -0.6942 | |
| 5 | R | J | -1.1659 | |
| 6 | A | J | -0.7029 | |
| 7 | D | J | -1.2749 | |
| 8 | A | J | -1.1792 | |
| 9 | R | J | -2.1262 | |
| 10 | A | J | -1.3126 | |
| 11 | D | J | -1.8496 | |
| 12 | A | J | -1.0904 | |
| 13 | R | J | -2.1183 | |
| 14 | A | J | -1.4231 | |
| 15 | D | J | -1.7392 | |
| 16 | A | J | -0.6777 | |
| 1 | R | K | -3.4254 | |
| 2 | A | K | -2.3896 | |
| 3 | D | K | -2.4248 | |
| 4 | A | K | -1.4258 | |
| 5 | R | K | -1.9637 | |
| 6 | A | K | -1.4028 | |
| 7 | D | K | -2.1564 | |
| 8 | A | K | -2.0022 | |
| 9 | R | K | -3.2570 | |
| 10 | A | K | -2.1259 | |
| 11 | D | K | -2.6524 | |
| 12 | A | K | -2.0657 | |
| 13 | R | K | -3.2352 | |
| 14 | A | K | -2.2291 | |
| 15 | D | K | -2.4882 | |
| 16 | A | K | -0.8730 | |
| 1 | R | L | -2.9280 | |
| 2 | A | L | -2.2437 | |
| 3 | D | L | -3.0370 | |
| 4 | A | L | -1.8894 | |
| 5 | R | L | -2.8339 | |
| 6 | A | L | -1.8614 | |
| 7 | D | L | -2.9330 | |
| 8 | A | L | -2.1359 | |
| 9 | R | L | -3.3027 | |
| 10 | A | L | -2.1724 | |
| 11 | D | L | -3.2012 | |
| 12 | A | L | -2.1491 | |
| 13 | R | L | -3.3974 | |
| 14 | A | L | -2.2707 | |
| 15 | D | L | -2.7300 | |
| 16 | A | L | -1.0086 |