Project name: FEFEFEGKGH20

Status: done

Started: 2026-02-10 01:57:08
Settings
Chain sequence(s) A: FEFEFEGKGH
C: FEFEFEGKGH
B: FEFEFEGKGH
E: FEFEFEGKGH
D: FEFEFEGKGH
G: FEFEFEGKGH
F: FEFEFEGKGH
I: FEFEFEGKGH
H: FEFEFEGKGH
K: FEFEFEGKGH
J: FEFEFEGKGH
M: FEFEFEGKGH
L: FEFEFEGKGH
O: FEFEFEGKGH
N: FEFEFEGKGH
Q: FEFEFEGKGH
P: FEFEFEGKGH
S: FEFEFEGKGH
R: FEFEFEGKGH
T: FEFEFEGKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:32:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:33:01)
Show buried residues

Minimal score value
-4.1219
Maximal score value
1.5585
Average score
-1.0527
Total score value
-210.5337

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.2486
2 E A -1.3148
3 F A -1.5496
4 E A -2.1682
5 F A -1.2202
6 E A -2.0488
7 G A 0.0000
8 K A -2.7015
9 G A 0.0000
10 H A -1.6110
1 F B 1.0788
2 E B -2.2156
3 F B -1.9585
4 E B -2.9684
5 F B -1.7630
6 E B -2.5183
7 G B 0.0000
8 K B -2.6819
9 G B 0.0000
10 H B -1.4439
1 F C 1.2066
2 E C -1.5670
3 F C -2.1678
4 E C -3.3837
5 F C -2.5777
6 E C -3.8089
7 G C 0.0000
8 K C -3.4894
9 G C 0.0000
10 H C -2.0077
1 F D 0.9361
2 E D -2.2002
3 F D -2.4957
4 E D -3.8800
5 F D -2.8572
6 E D -4.1219
7 G D 0.0000
8 K D -3.4464
9 G D 0.0000
10 H D -1.6201
1 F E 1.0225
2 E E -1.3096
3 F E -1.8220
4 E E -3.3439
5 F E -2.8065
6 E E -3.9906
7 G E 0.0000
8 K E -3.5596
9 G E 0.0000
10 H E -2.0430
1 F F 0.8794
2 E F -2.1013
3 F F -2.0349
4 E F -3.1182
5 F F -2.4973
6 E F -3.7148
7 G F 0.0000
8 K F -3.2042
9 G F 0.0000
10 H F -1.3299
1 F G 1.0611
2 E G -1.8765
3 F G -1.7272
4 E G -3.0422
5 F G -2.2187
6 E G -3.6200
7 G G 0.0000
8 K G -3.0539
9 G G 0.0000
10 H G -1.7223
1 F H 1.1323
2 E H -1.8286
3 F H -1.5222
4 E H -3.0161
5 F H -1.8436
6 E H -2.8252
7 G H 0.0000
8 K H -2.5841
9 G H 0.0000
10 H H -1.4249
1 F I 1.1321
2 E I -0.9660
3 F I -0.8589
4 E I -1.8152
5 F I -1.0389
6 E I -1.5378
7 G I 0.0000
8 K I -2.1794
9 G I 0.0000
10 H I -1.0976
1 F J 1.5060
2 E J -1.0527
3 F J -0.7659
4 E J -1.6652
5 F J -0.8651
6 E J -1.2878
7 G J 0.0000
8 K J 0.0000
9 G J 0.0000
10 H J -0.8327
1 F K -0.6865
2 E K -1.5618
3 F K -0.6595
4 E K 0.0000
5 F K -0.5870
6 E K 0.0000
7 G K 0.0000
8 K K 0.0000
9 G K 0.0000
10 H K -0.7084
1 F L 0.5351
2 E L -1.7259
3 F L -0.8010
4 E L -1.4892
5 F L -0.4553
6 E L 0.0000
7 G L 0.0000
8 K L -1.5301
9 G L 0.0000
10 H L 0.0000
1 F M -0.6720
2 E M -1.9199
3 F M 0.0000
4 E M -2.0499
5 F M 0.0000
6 E M -1.6854
7 G M 0.0000
8 K M -1.7278
9 G M 0.0000
10 H M -1.6093
1 F N -1.6013
2 E N -2.1054
3 F N 0.0000
4 E N -1.9002
5 F N 0.0000
6 E N -1.7620
7 G N 0.0000
8 K N -1.9039
9 G N 0.0000
10 H N -1.4136
1 F O 0.0884
2 E O -1.2108
3 F O 0.0000
4 E O -1.4870
5 F O 0.0000
6 E O -1.9569
7 G O 0.0000
8 K O -1.9008
9 G O 0.0000
10 H O -2.3070
1 F P 0.0000
2 E P -1.8178
3 F P 0.0000
4 E P -1.7735
5 F P 0.0000
6 E P -1.3921
7 G P -0.5832
8 K P -0.8169
9 G P 0.0000
10 H P -1.3663
1 F Q 0.9855
2 E Q -1.4651
3 F Q -0.5666
4 E Q -0.9795
5 F Q -0.3252
6 E Q 0.0000
7 G Q 0.0000
8 K Q -1.9765
9 G Q 0.0000
10 H Q -0.8664
1 F R 1.1347
2 E R -0.7381
3 F R -0.9215
4 E R 0.0000
5 F R -0.6984
6 E R 0.0000
7 G R 0.0000
8 K R -1.0968
9 G R 0.0000
10 H R -1.2139
1 F S 1.1368
2 E S -1.4175
3 F S -1.1429
4 E S -1.3558
5 F S -0.1964
6 E S -0.8279
7 G S 0.0000
8 K S -1.3947
9 G S 0.0000
10 H S -0.9915
1 F T 1.5585
2 E T -1.0833
3 F T -0.8514
4 E T -1.9641
5 F T -0.6886
6 E T -0.9798
7 G T 0.0000
8 K T -1.9212
9 G T 0.0000
10 H T -1.4135
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Laboratory of Theory of Biopolymers 2018