Project name: query_structure

Status: done

Started: 2026-03-16 23:02:33
Settings
Chain sequence(s) A: DCAKEGEVCSWGKKCCDLDNFYCPMEFIPHCKKYKPYVPVTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-4.1035
Maximal score value
2.4624
Average score
-0.8276
Total score value
-34.7593

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.3153
2 C A -2.4636
3 A A 0.0000
4 K A -3.8976
5 E A -4.1035
6 G A -3.0066
7 E A -3.0583
8 V A -1.2235
9 C A 0.0000
10 S A -0.4353
11 W A 0.7759
12 G A -0.7032
13 K A -2.8039
14 K A -2.7859
15 C A 0.0000
16 C A -2.0483
17 D A -2.5143
18 L A -1.0858
19 D A -2.1261
20 N A -2.3220
21 F A -2.0906
22 Y A -0.7688
23 C A -0.6033
24 P A 0.3141
25 M A 0.7572
26 E A -0.0584
27 F A 1.9355
28 I A 1.6658
29 P A 0.0000
30 H A -1.7197
31 C A 0.0000
32 K A -2.8845
33 K A -2.7989
34 Y A -0.7747
35 K A -1.3298
36 P A 0.4635
37 Y A 1.9129
38 V A 2.4624
39 P A 1.7236
40 V A 2.1413
41 T A 0.7055
42 T A 0.3049
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Laboratory of Theory of Biopolymers 2018