| Chain sequence(s) |
A: DCAKEGEVCSWGKKCCDLDNFYCPMEFIPHCKKYKPYVPVTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.3153 | |
| 2 | C | A | -2.4636 | |
| 3 | A | A | 0.0000 | |
| 4 | K | A | -3.8976 | |
| 5 | E | A | -4.1035 | |
| 6 | G | A | -3.0066 | |
| 7 | E | A | -3.0583 | |
| 8 | V | A | -1.2235 | |
| 9 | C | A | 0.0000 | |
| 10 | S | A | -0.4353 | |
| 11 | W | A | 0.7759 | |
| 12 | G | A | -0.7032 | |
| 13 | K | A | -2.8039 | |
| 14 | K | A | -2.7859 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | -2.0483 | |
| 17 | D | A | -2.5143 | |
| 18 | L | A | -1.0858 | |
| 19 | D | A | -2.1261 | |
| 20 | N | A | -2.3220 | |
| 21 | F | A | -2.0906 | |
| 22 | Y | A | -0.7688 | |
| 23 | C | A | -0.6033 | |
| 24 | P | A | 0.3141 | |
| 25 | M | A | 0.7572 | |
| 26 | E | A | -0.0584 | |
| 27 | F | A | 1.9355 | |
| 28 | I | A | 1.6658 | |
| 29 | P | A | 0.0000 | |
| 30 | H | A | -1.7197 | |
| 31 | C | A | 0.0000 | |
| 32 | K | A | -2.8845 | |
| 33 | K | A | -2.7989 | |
| 34 | Y | A | -0.7747 | |
| 35 | K | A | -1.3298 | |
| 36 | P | A | 0.4635 | |
| 37 | Y | A | 1.9129 | |
| 38 | V | A | 2.4624 | |
| 39 | P | A | 1.7236 | |
| 40 | V | A | 2.1413 | |
| 41 | T | A | 0.7055 | |
| 42 | T | A | 0.3049 |