| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGYTFTNYGMNWVRQAPGKGLEWVGWINTYTGEPTYAADFKRRFTFSLDTSKSTAYLQMNSLRAEDTAVYYCAKYPHYYGSSHWYFDVWGQGTLVT
L: DIQMTQSPSSLSASVGDRVTITCSASQDISNYLNWYQQKPGKAPKVLIYFTSSLHSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYSTVPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9231 | |
| 2 | V | H | -0.8625 | |
| 3 | Q | H | -0.9343 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1596 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2005 | |
| 8 | G | H | -0.4954 | |
| 9 | G | H | 0.0602 | |
| 11 | G | H | 0.6531 | |
| 12 | L | H | 1.2474 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.4424 | |
| 15 | P | H | -1.9787 | |
| 16 | G | H | -1.6877 | |
| 17 | G | H | -1.3993 | |
| 18 | S | H | -1.4788 | |
| 19 | L | H | -0.9498 | |
| 20 | R | H | -1.7121 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1769 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0953 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7574 | |
| 27 | G | H | -1.0527 | |
| 28 | Y | H | -0.5540 | |
| 29 | T | H | -0.3872 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.1153 | |
| 36 | N | H | -0.9523 | |
| 37 | Y | H | -0.3205 | |
| 38 | G | H | -0.2413 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6750 | |
| 45 | A | H | 0.0000 | |
| 46 | P | H | -0.8314 | |
| 47 | G | H | -1.4779 | |
| 48 | K | H | -2.3236 | |
| 49 | G | H | -1.5463 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0203 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.0897 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.6126 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 0.6278 | |
| 62 | T | H | -0.1265 | |
| 63 | G | H | -0.7776 | |
| 64 | E | H | -1.7945 | |
| 65 | P | H | -1.0067 | |
| 66 | T | H | -0.4715 | |
| 67 | Y | H | -0.6655 | |
| 68 | A | H | 0.0000 | |
| 69 | A | H | -1.6398 | |
| 70 | D | H | -2.6867 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.1410 | |
| 74 | R | H | -3.3296 | |
| 75 | R | H | -2.4598 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.1694 | |
| 78 | F | H | 0.0000 | |
| 79 | S | H | -0.3751 | |
| 80 | L | H | -0.2374 | |
| 81 | D | H | -0.8287 | |
| 82 | T | H | -0.6609 | |
| 83 | S | H | -1.1351 | |
| 84 | K | H | -1.9256 | |
| 85 | S | H | -1.0127 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2858 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2987 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.2053 | |
| 93 | S | H | -1.8012 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.0506 | |
| 96 | A | H | -1.9946 | |
| 97 | E | H | -2.4603 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.5308 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5913 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | P | H | 0.0000 | |
| 109 | H | H | 0.0584 | |
| 110 | Y | H | 1.3803 | |
| 111 | Y | H | 1.4584 | |
| 111A | G | H | 0.3592 | |
| 112B | S | H | 0.2342 | |
| 112A | S | H | 0.3756 | |
| 112 | H | H | 0.5382 | |
| 113 | W | H | 0.4887 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3956 | |
| 117 | V | H | -0.0952 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.2948 | |
| 121 | G | H | -0.3891 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.4317 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1429 | |
| 1 | D | L | -2.0166 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.9684 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.8891 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4509 | |
| 8 | P | L | -0.6001 | |
| 9 | S | L | -0.9622 | |
| 10 | S | L | -1.1475 | |
| 11 | L | L | -0.8432 | |
| 12 | S | L | -0.8930 | |
| 13 | A | L | -1.0109 | |
| 14 | S | L | -0.8140 | |
| 15 | V | L | -0.0430 | |
| 16 | G | L | -0.7547 | |
| 17 | D | L | -1.7222 | |
| 18 | R | L | -2.2744 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6159 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5860 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.5093 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9093 | |
| 27 | Q | L | -2.5288 | |
| 28 | D | L | -2.6465 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.0253 | |
| 37 | N | L | -0.4352 | |
| 38 | Y | L | 0.5524 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.6843 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.4740 | |
| 46 | P | L | -1.1026 | |
| 47 | G | L | -1.6341 | |
| 48 | K | L | -2.5291 | |
| 49 | A | L | -1.4928 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0981 | |
| 52 | V | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.7078 | |
| 56 | F | L | 0.8636 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | 0.0445 | |
| 66 | S | L | 0.2685 | |
| 67 | L | L | 0.3709 | |
| 68 | H | L | -0.1982 | |
| 69 | S | L | -0.3669 | |
| 70 | G | L | -0.5002 | |
| 71 | V | L | -0.2707 | |
| 72 | P | L | -0.3472 | |
| 74 | S | L | -0.4074 | |
| 75 | R | L | -0.6894 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3249 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.6900 | |
| 80 | G | L | -1.0706 | |
| 83 | S | L | -1.2209 | |
| 84 | G | L | -1.7530 | |
| 85 | T | L | -2.1108 | |
| 86 | D | L | -2.4804 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6563 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5915 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2420 | |
| 93 | S | L | -1.1128 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7883 | |
| 96 | P | L | -0.9082 | |
| 97 | E | L | -1.5866 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.1072 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.9885 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | S | L | -0.0473 | |
| 109 | T | L | 0.1540 | |
| 114 | V | L | 0.6331 | |
| 115 | P | L | 0.0851 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.6889 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6077 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.9711 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2322 | |
| 126 | I | L | -0.6953 | |
| 127 | K | L | -1.5755 |