| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFNISAPGIHWVRQAPGKGLEWVGFINPAGGYTDYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDYIRQYWTYVLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0596 | |
| 2 | V | H | -1.2872 | |
| 3 | Q | H | -1.1869 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3571 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3042 | |
| 8 | G | H | -0.6083 | |
| 9 | G | H | 0.2278 | |
| 11 | G | H | 0.7231 | |
| 12 | L | H | 1.4341 | |
| 13 | V | H | 0.0125 | |
| 14 | Q | H | -1.3102 | |
| 15 | P | H | -1.6025 | |
| 16 | G | H | -1.4089 | |
| 17 | G | H | -0.9754 | |
| 18 | S | H | -1.0824 | |
| 19 | L | H | -0.6732 | |
| 20 | R | H | -1.4750 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3203 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2244 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9682 | |
| 27 | G | H | -1.3722 | |
| 28 | F | H | -1.0084 | |
| 29 | N | H | -1.5191 | |
| 30 | I | H | 0.0000 | |
| 35 | S | H | -0.6987 | |
| 36 | A | H | -0.3060 | |
| 37 | P | H | -0.0266 | |
| 38 | G | H | 0.0000 | |
| 39 | I | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6078 | |
| 45 | A | H | -1.0129 | |
| 46 | P | H | -0.7995 | |
| 47 | G | H | -1.4857 | |
| 48 | K | H | -2.3675 | |
| 49 | G | H | -1.6104 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9977 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.0826 | |
| 58 | P | H | -0.4361 | |
| 59 | A | H | -0.2055 | |
| 62 | G | H | -0.3752 | |
| 63 | G | H | -0.1974 | |
| 64 | Y | H | 0.7738 | |
| 65 | T | H | 0.2124 | |
| 66 | D | H | -0.4733 | |
| 67 | Y | H | -0.9902 | |
| 68 | A | H | -1.6191 | |
| 69 | D | H | -2.4483 | |
| 70 | S | H | -1.6685 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4527 | |
| 74 | G | H | -1.6125 | |
| 75 | R | H | -1.3726 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8028 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1597 | |
| 80 | A | H | -0.5691 | |
| 81 | D | H | -0.9861 | |
| 82 | T | H | -1.1828 | |
| 83 | S | H | -1.3548 | |
| 84 | K | H | -2.1523 | |
| 85 | N | H | -1.5190 | |
| 86 | T | H | -0.8521 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3389 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0002 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2204 | |
| 93 | S | H | -1.1874 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2427 | |
| 96 | A | H | -1.6883 | |
| 97 | E | H | -2.2286 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3244 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.8195 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.2584 | |
| 107 | D | H | 0.0000 | |
| 108 | Y | H | 0.7879 | |
| 109 | I | H | 0.5755 | |
| 110 | R | H | -1.0210 | |
| 111 | Q | H | -0.7437 | |
| 111A | Y | H | 1.0829 | |
| 112A | W | H | 1.8305 | |
| 112 | T | H | 0.9463 | |
| 113 | Y | H | 1.0950 | |
| 114 | V | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | -0.0652 | |
| 118 | W | H | -0.5291 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.4853 | |
| 121 | G | H | -0.3770 | |
| 122 | T | H | 0.5163 | |
| 123 | L | H | 1.7013 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3877 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7293 | |
| 128 | S | H | -0.5544 | |
| 1 | D | L | -2.2748 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.3242 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3939 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.8391 | |
| 8 | P | L | -0.5859 | |
| 9 | S | L | -0.8080 | |
| 10 | S | L | -0.9229 | |
| 11 | L | L | -0.7361 | |
| 12 | S | L | -1.0723 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.6005 | |
| 15 | V | L | 0.3932 | |
| 16 | G | L | -0.5658 | |
| 17 | D | L | -1.4086 | |
| 18 | R | L | -2.1554 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6097 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.7459 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.8062 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.2042 | |
| 27 | Q | L | -2.8697 | |
| 28 | D | L | -2.5962 | |
| 29 | V | L | 0.0000 | |
| 36 | N | L | -1.8648 | |
| 37 | T | L | -0.7948 | |
| 38 | A | L | 0.1057 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9961 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7805 | |
| 46 | P | L | -1.2474 | |
| 47 | G | L | -1.6655 | |
| 48 | K | L | -2.7191 | |
| 49 | A | L | -1.7634 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.9089 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 1.2277 | |
| 56 | S | L | 0.6223 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | 0.7662 | |
| 66 | F | L | 2.2628 | |
| 67 | L | L | 1.4716 | |
| 68 | Y | L | 0.6269 | |
| 69 | S | L | 0.0148 | |
| 70 | G | L | -0.4873 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3720 | |
| 74 | S | L | -0.4185 | |
| 75 | R | L | -0.7967 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | 0.0512 | |
| 78 | G | L | 0.1339 | |
| 79 | S | L | -0.5510 | |
| 80 | R | L | -1.6249 | |
| 83 | S | L | -1.3355 | |
| 84 | G | L | -1.7634 | |
| 85 | T | L | -2.2026 | |
| 86 | D | L | -1.9742 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7556 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6489 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4088 | |
| 93 | S | L | -1.0768 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5556 | |
| 96 | P | L | -0.9241 | |
| 97 | E | L | -1.6078 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.4299 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8552 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | H | L | 0.0000 | |
| 108 | Y | L | 0.8395 | |
| 109 | T | L | 0.2739 | |
| 114 | T | L | -0.2595 | |
| 115 | P | L | -0.6971 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | -0.6866 | |
| 118 | F | L | -0.4543 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.6371 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3071 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.4397 | |
| 126 | I | L | -0.7308 | |
| 127 | K | L | -1.5241 |