Project name: Ispectamab

Status: done

Started: 2026-03-23 04:15:59
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFNISAPGIHWVRQAPGKGLEWVGFINPAGGYTDYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDYIRQYWTYVLDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-2.8697
Maximal score value
2.2628
Average score
-0.51
Total score value
-116.801

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.0596
2 V H -1.2872
3 Q H -1.1869
4 L H 0.0000
5 V H 0.3571
6 E H 0.0000
7 S H -0.3042
8 G H -0.6083
9 G H 0.2278
11 G H 0.7231
12 L H 1.4341
13 V H 0.0125
14 Q H -1.3102
15 P H -1.6025
16 G H -1.4089
17 G H -0.9754
18 S H -1.0824
19 L H -0.6732
20 R H -1.4750
21 L H 0.0000
22 S H -0.3203
23 C H 0.0000
24 A H -0.2244
25 A H 0.0000
26 S H -0.9682
27 G H -1.3722
28 F H -1.0084
29 N H -1.5191
30 I H 0.0000
35 S H -0.6987
36 A H -0.3060
37 P H -0.0266
38 G H 0.0000
39 I H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6078
45 A H -1.0129
46 P H -0.7995
47 G H -1.4857
48 K H -2.3675
49 G H -1.6104
50 L H 0.0000
51 E H -0.9977
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 F H 0.0000
56 I H 0.0000
57 N H -0.0826
58 P H -0.4361
59 A H -0.2055
62 G H -0.3752
63 G H -0.1974
64 Y H 0.7738
65 T H 0.2124
66 D H -0.4733
67 Y H -0.9902
68 A H -1.6191
69 D H -2.4483
70 S H -1.6685
71 V H 0.0000
72 K H -2.4527
74 G H -1.6125
75 R H -1.3726
76 F H 0.0000
77 T H -0.8028
78 I H 0.0000
79 S H -0.1597
80 A H -0.5691
81 D H -0.9861
82 T H -1.1828
83 S H -1.3548
84 K H -2.1523
85 N H -1.5190
86 T H -0.8521
87 A H 0.0000
88 Y H -0.3389
89 L H 0.0000
90 Q H -1.0002
91 M H 0.0000
92 N H -1.2204
93 S H -1.1874
94 L H 0.0000
95 R H -2.2427
96 A H -1.6883
97 E H -2.2286
98 D H 0.0000
99 T H -0.3244
100 A H 0.0000
101 V H 0.8195
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.2584
107 D H 0.0000
108 Y H 0.7879
109 I H 0.5755
110 R H -1.0210
111 Q H -0.7437
111A Y H 1.0829
112A W H 1.8305
112 T H 0.9463
113 Y H 1.0950
114 V H 0.0000
115 L H 0.0000
116 D H 0.0000
117 Y H -0.0652
118 W H -0.5291
119 G H 0.0000
120 Q H -1.4853
121 G H -0.3770
122 T H 0.5163
123 L H 1.7013
124 V H 0.0000
125 T H 0.3877
126 V H 0.0000
127 S H -0.7293
128 S H -0.5544
1 D L -2.2748
2 I L 0.0000
3 Q L -2.3242
4 M L 0.0000
5 T L -1.3939
6 Q L 0.0000
7 S L -0.8391
8 P L -0.5859
9 S L -0.8080
10 S L -0.9229
11 L L -0.7361
12 S L -1.0723
13 A L 0.0000
14 S L -0.6005
15 V L 0.3932
16 G L -0.5658
17 D L -1.4086
18 R L -2.1554
19 V L 0.0000
20 T L -0.6097
21 I L 0.0000
22 T L -0.7459
23 C L 0.0000
24 R L -2.8062
25 A L 0.0000
26 S L -2.2042
27 Q L -2.8697
28 D L -2.5962
29 V L 0.0000
36 N L -1.8648
37 T L -0.7948
38 A L 0.1057
39 V L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9961
44 Q L 0.0000
45 K L -1.7805
46 P L -1.2474
47 G L -1.6655
48 K L -2.7191
49 A L -1.7634
50 P L 0.0000
51 K L -1.9089
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 1.2277
56 S L 0.6223
57 A L 0.0000
65 S L 0.7662
66 F L 2.2628
67 L L 1.4716
68 Y L 0.6269
69 S L 0.0148
70 G L -0.4873
71 V L 0.0000
72 P L -0.3720
74 S L -0.4185
75 R L -0.7967
76 F L 0.0000
77 S L 0.0512
78 G L 0.1339
79 S L -0.5510
80 R L -1.6249
83 S L -1.3355
84 G L -1.7634
85 T L -2.2026
86 D L -1.9742
87 F L 0.0000
88 T L -0.7556
89 L L 0.0000
90 T L -0.6489
91 I L 0.0000
92 S L -1.4088
93 S L -1.0768
94 L L 0.0000
95 Q L -0.5556
96 P L -0.9241
97 E L -1.6078
98 D L 0.0000
99 F L -0.4299
100 A L 0.0000
101 T L -0.8552
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 H L 0.0000
108 Y L 0.8395
109 T L 0.2739
114 T L -0.2595
115 P L -0.6971
116 P L 0.0000
117 T L -0.6866
118 F L -0.4543
119 G L 0.0000
120 Q L -1.6371
121 G L 0.0000
122 T L 0.0000
123 K L -1.3071
124 V L 0.0000
125 E L -1.4397
126 I L -0.7308
127 K L -1.5241
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Laboratory of Theory of Biopolymers 2018