| Chain sequence(s) |
B: LMDEIMKLTKEIKELMKKAYELLKEDPEAAEKELKKVKEQAKKLKALLDA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48)
[INFO] Main: Simulation completed successfully. (00:03:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.3742 | |
| 2 | M | B | 0.9032 | |
| 3 | D | B | -1.4351 | |
| 4 | E | B | -1.6403 | |
| 5 | I | B | -0.4027 | |
| 6 | M | B | -0.6626 | |
| 7 | K | B | -2.6420 | |
| 8 | L | B | -2.3163 | |
| 9 | T | B | -2.0919 | |
| 10 | K | B | -3.3446 | |
| 11 | E | B | -3.3736 | |
| 12 | I | B | -3.0183 | |
| 13 | K | B | -3.7716 | |
| 14 | E | B | -3.6579 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | -2.1464 | |
| 17 | K | B | -2.7729 | |
| 18 | K | B | -2.2277 | |
| 19 | A | B | 0.0000 | |
| 20 | Y | B | -1.0308 | |
| 21 | E | B | -2.5554 | |
| 22 | L | B | -2.5322 | |
| 23 | L | B | -1.7425 | |
| 24 | K | B | -2.6274 | |
| 25 | E | B | -3.2682 | |
| 26 | D | B | -3.0373 | |
| 27 | P | B | -2.6784 | |
| 28 | E | B | -3.3058 | |
| 29 | A | B | -3.0193 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -3.6513 | |
| 32 | K | B | -3.7734 | |
| 33 | E | B | 0.0000 | |
| 34 | L | B | -2.9063 | |
| 35 | K | B | -4.2001 | |
| 36 | K | B | -3.8445 | |
| 37 | V | B | 0.0000 | |
| 38 | K | B | -3.9962 | |
| 39 | E | B | -4.4414 | |
| 40 | Q | B | -3.2650 | |
| 41 | A | B | -3.1708 | |
| 42 | K | B | -3.7893 | |
| 43 | K | B | -3.0645 | |
| 44 | L | B | -2.0090 | |
| 45 | K | B | -2.5551 | |
| 46 | A | B | -1.5879 | |
| 47 | L | B | -0.2411 | |
| 48 | L | B | 0.3022 | |
| 49 | D | B | -1.4587 | |
| 50 | A | B | -0.2844 |