| Chain sequence(s) |
A: GLPCGESCVFIPCITTVVGCSCKNKVCYND
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7564 | |
| 2 | L | A | 0.7209 | |
| 3 | P | A | -0.0119 | |
| 4 | C | A | 0.2853 | |
| 5 | G | A | -0.3763 | |
| 6 | E | A | 0.0590 | |
| 7 | S | A | 0.2834 | |
| 8 | C | A | 1.0019 | |
| 9 | V | A | 1.7396 | |
| 10 | F | A | 2.9816 | |
| 11 | I | A | 2.9747 | |
| 12 | P | A | 1.6545 | |
| 13 | C | A | 0.0000 | |
| 14 | I | A | 2.7517 | |
| 15 | T | A | 1.9516 | |
| 16 | T | A | 1.8665 | |
| 17 | V | A | 2.9279 | |
| 18 | V | A | 2.4615 | |
| 19 | G | A | 0.7002 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.4804 | |
| 22 | C | A | -0.7421 | |
| 23 | K | A | -2.2720 | |
| 24 | N | A | -2.3482 | |
| 25 | K | A | -1.6709 | |
| 26 | V | A | -0.9682 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.8129 | |
| 29 | N | A | -1.0429 | |
| 30 | D | A | -1.8338 |