| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAYQHDTADVRVPFSWDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPDAPPPSPLYVPPPPTSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPLLNVYNPENFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9454 | |
| 2 | L | A | 1.9678 | |
| 3 | P | A | 0.6625 | |
| 4 | P | A | 0.3574 | |
| 5 | T | A | 0.1149 | |
| 6 | T | A | 0.1344 | |
| 7 | P | A | 0.1541 | |
| 8 | V | A | 1.2349 | |
| 9 | A | A | 0.0738 | |
| 10 | K | A | -1.0341 | |
| 11 | V | A | -0.1825 | |
| 12 | Q | A | -1.4170 | |
| 13 | S | A | -1.5636 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4258 | |
| 16 | E | A | -2.4422 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4581 | |
| 20 | P | A | 0.1284 | |
| 21 | T | A | 0.1623 | |
| 22 | S | A | -0.0922 | |
| 23 | L | A | 0.1015 | |
| 24 | F | A | -0.0160 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2957 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9028 | |
| 31 | R | A | -2.6865 | |
| 32 | L | A | -0.8041 | |
| 33 | L | A | 1.1539 | |
| 34 | T | A | 1.3637 | |
| 35 | V | A | 1.8221 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2204 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5987 | |
| 40 | K | A | -1.6278 | |
| 41 | D | A | -0.9288 | |
| 42 | I | A | 0.8203 | |
| 43 | V | A | 0.8740 | |
| 44 | K | A | -1.4276 | |
| 45 | D | A | -2.4464 | |
| 46 | G | A | -1.4916 | |
| 47 | K | A | -1.1532 | |
| 48 | V | A | 1.3105 | |
| 49 | V | A | 1.9262 | |
| 50 | V | A | 1.2233 | |
| 51 | P | A | 0.4267 | |
| 52 | K | A | -0.6439 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1610 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3952 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2720 | |
| 70 | K | A | -1.7926 | |
| 71 | F | A | -0.6439 | |
| 72 | A | A | -0.5778 | |
| 73 | L | A | -0.8619 | |
| 74 | P | A | -1.2055 | |
| 75 | Q | A | -2.5077 | |
| 76 | K | A | -3.1087 | |
| 77 | D | A | -2.9931 | |
| 78 | F | A | -1.6666 | |
| 79 | Y | A | -1.8880 | |
| 80 | D | A | -2.6891 | |
| 81 | P | A | -2.3097 | |
| 82 | E | A | -3.0526 | |
| 83 | K | A | -3.3961 | |
| 84 | E | A | -2.4601 | |
| 85 | R | A | -1.2932 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6454 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9605 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3559 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6980 | |
| 99 | G | A | -0.5412 | |
| 100 | P | A | -0.4156 | |
| 101 | L | A | 0.0213 | |
| 102 | G | A | -0.2290 | |
| 103 | K | A | -0.6402 | |
| 104 | G | A | -0.4646 | |
| 105 | T | A | -0.4604 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.0939 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3005 | |
| 110 | L | A | 0.3375 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0244 | |
| 113 | K | A | -0.4979 | |
| 114 | L | A | -0.9154 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.1902 | |
| 117 | T | A | -0.8150 | |
| 118 | E | A | -1.7660 | |
| 119 | N | A | -1.9385 | |
| 120 | P | A | -1.3141 | |
| 121 | T | A | -0.6368 | |
| 122 | A | A | -0.2001 | |
| 123 | Y | A | 0.5020 | |
| 124 | Q | A | -0.5376 | |
| 125 | H | A | -0.6500 | |
| 126 | D | A | -1.4426 | |
| 127 | T | A | -1.0588 | |
| 128 | A | A | -1.1496 | |
| 129 | D | A | -1.9146 | |
| 130 | V | A | -1.0567 | |
| 131 | R | A | -0.8218 | |
| 132 | V | A | 0.1819 | |
| 133 | P | A | 0.1141 | |
| 134 | F | A | 0.1172 | |
| 135 | S | A | -0.1518 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.5384 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5620 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1954 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2122 | |
| 157 | D | A | 0.5464 | |
| 158 | L | A | 1.1804 | |
| 159 | A | A | 0.9593 | |
| 160 | P | A | 0.0927 | |
| 161 | P | A | 0.4536 | |
| 162 | C | A | 0.5120 | |
| 163 | P | A | 0.0072 | |
| 164 | G | A | -0.0933 | |
| 165 | L | A | 0.5660 | |
| 166 | P | A | -0.1215 | |
| 167 | P | A | -0.3426 | |
| 168 | G | A | -0.4530 | |
| 169 | A | A | -0.0315 | |
| 170 | C | A | 0.6412 | |
| 171 | P | A | 0.7479 | |
| 172 | P | A | 1.1923 | |
| 173 | I | A | 2.3212 | |
| 174 | Q | A | 1.2545 | |
| 175 | L | A | 1.5790 | |
| 176 | V | A | 0.9010 | |
| 177 | N | A | -0.2823 | |
| 178 | S | A | 0.0253 | |
| 179 | V | A | 0.4275 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3886 | |
| 182 | D | A | 0.0840 | |
| 183 | G | A | -0.1552 | |
| 184 | D | A | -0.5264 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1369 | |
| 190 | F | A | 0.0631 | |
| 191 | G | A | -0.1026 | |
| 192 | N | A | -0.2499 | |
| 193 | M | A | -0.0897 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3921 | |
| 197 | E | A | -2.6177 | |
| 198 | L | A | -1.2379 | |
| 199 | Q | A | -2.5650 | |
| 200 | Q | A | -3.3140 | |
| 201 | D | A | -3.5789 | |
| 202 | R | A | -3.3218 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2165 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3424 | |
| 211 | S | A | -1.8694 | |
| 212 | T | A | -1.4236 | |
| 213 | R | A | -2.0585 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1519 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3385 | |
| 220 | L | A | 0.5997 | |
| 221 | K | A | -1.1152 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8221 | |
| 224 | N | A | -1.4964 | |
| 225 | E | A | -1.2392 | |
| 226 | A | A | -0.6120 | |
| 227 | Y | A | -0.3748 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6596 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0726 | |
| 234 | F | A | 0.2621 | |
| 235 | G | A | -0.8045 | |
| 236 | R | A | -2.5581 | |
| 237 | R | A | -2.7699 | |
| 238 | E | A | -2.0305 | |
| 239 | Q | A | -0.0856 | |
| 240 | V | A | 1.4962 | |
| 241 | Y | A | 1.2618 | |
| 242 | A | A | 0.2120 | |
| 243 | R | A | -1.1048 | |
| 244 | H | A | -0.9760 | |
| 245 | F | A | 0.0109 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6723 | |
| 249 | A | A | -1.1950 | |
| 250 | G | A | -1.0280 | |
| 251 | P | A | -1.1274 | |
| 252 | E | A | -1.3414 | |
| 253 | G | A | -1.2625 | |
| 254 | H | A | -1.4537 | |
| 255 | P | A | -1.3389 | |
| 256 | L | A | -0.3620 | |
| 257 | P | A | -0.8765 | |
| 258 | D | A | -1.7397 | |
| 259 | A | A | -0.5496 | |
| 260 | P | A | -0.6761 | |
| 261 | P | A | -0.1985 | |
| 262 | P | A | 0.0410 | |
| 263 | S | A | 0.2817 | |
| 264 | P | A | 0.7033 | |
| 265 | L | A | 1.6703 | |
| 266 | Y | A | 1.4830 | |
| 267 | V | A | 1.9210 | |
| 268 | P | A | 0.6773 | |
| 269 | P | A | 0.5930 | |
| 270 | P | A | -0.0915 | |
| 271 | P | A | -0.0729 | |
| 272 | T | A | 0.0200 | |
| 273 | S | A | 0.3209 | |
| 274 | P | A | 0.5446 | |
| 275 | Y | A | 1.3445 | |
| 276 | A | A | 0.9859 | |
| 277 | V | A | 1.5505 | |
| 278 | R | A | 0.3152 | |
| 279 | P | A | -0.3998 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5365 | |
| 282 | D | A | -0.9556 | |
| 283 | Y | A | 0.8457 | |
| 284 | F | A | 0.6784 | |
| 285 | G | A | 0.2163 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9367 | |
| 291 | L | A | 1.6201 | |
| 292 | V | A | 0.6272 | |
| 293 | S | A | -0.1599 | |
| 294 | S | A | -0.9623 | |
| 295 | D | A | -1.8416 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0881 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6169 | |
| 301 | R | A | -1.8260 | |
| 302 | P | A | -0.9644 | |
| 303 | F | A | -0.1873 | |
| 304 | W | A | -0.5602 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0814 | |
| 307 | R | A | -2.8355 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2743 | |
| 310 | G | A | -1.2332 | |
| 311 | N | A | -1.2805 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7954 | |
| 319 | N | A | -0.8480 | |
| 320 | E | A | -1.0374 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3530 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0905 | |
| 333 | N | A | 0.5462 | |
| 334 | F | A | 1.7420 | |
| 335 | T | A | 0.8650 | |
| 336 | I | A | 0.4048 | |
| 337 | S | A | -0.8758 | |
| 338 | Q | A | -1.4779 | |
| 339 | Q | A | -0.6023 | |
| 340 | L | A | 0.6796 | |
| 341 | S | A | 0.7111 | |
| 342 | T | A | 0.5777 | |
| 343 | P | A | 0.5619 | |
| 344 | L | A | 1.7012 | |
| 345 | L | A | 1.4811 | |
| 346 | N | A | 0.4201 | |
| 347 | V | A | 1.9972 | |
| 348 | Y | A | 1.4215 | |
| 349 | N | A | -0.3364 | |
| 350 | P | A | -1.4835 | |
| 351 | E | A | -2.0196 | |
| 352 | N | A | -0.8633 | |
| 353 | F | A | -1.2252 | |
| 354 | K | A | -2.1498 | |
| 355 | N | A | -1.7489 | |
| 356 | Y | A | -0.1464 | |
| 357 | L | A | 0.6400 | |
| 358 | R | A | 0.9661 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3800 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0856 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0568 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6908 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3020 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3142 | |
| 376 | L | A | -1.7114 | |
| 377 | D | A | -1.9946 | |
| 378 | P | A | -1.0408 | |
| 379 | G | A | -1.0155 | |
| 380 | V | A | -0.9341 | |
| 381 | L | A | -0.5311 | |
| 382 | A | A | -0.6554 | |
| 383 | H | A | -0.8094 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4090 | |
| 386 | T | A | -0.5522 | |
| 387 | M | A | -0.3022 | |
| 388 | N | A | -0.8635 | |
| 389 | P | A | -1.2419 | |
| 390 | T | A | -1.4389 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4465 | |
| 393 | E | A | -2.7783 | |
| 394 | N | A | -2.3417 | |
| 395 | W | A | -1.3922 | |
| 396 | N | A | -1.1778 | |
| 397 | L | A | -0.2345 | |
| 398 | G | A | 0.4911 | |
| 399 | F | A | 2.3995 | |
| 400 | V | A | 1.8077 | |
| 401 | P | A | 0.0354 | |
| 402 | P | A | -1.8542 | |
| 403 | K | A | -3.3037 | |
| 404 | E | A | -3.7489 | |
| 405 | R | A | -3.8486 | |
| 406 | E | A | -3.7656 | |
| 407 | D | A | -2.8717 | |
| 408 | P | A | -1.7646 | |
| 409 | Y | A | -0.9923 | |
| 410 | K | A | -2.1182 | |
| 411 | G | A | -0.6448 | |
| 412 | L | A | 0.6713 | |
| 413 | I | A | 1.5892 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3904 | |
| 416 | E | A | -1.6946 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9571 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0597 | |
| 421 | E | A | -2.7905 | |
| 422 | R | A | -2.6504 | |
| 423 | F | A | -1.2872 | |
| 424 | S | A | -1.4684 | |
| 425 | Q | A | -1.8432 | |
| 426 | D | A | -2.8891 | |
| 427 | L | A | -1.9771 | |
| 428 | D | A | -2.7576 | |
| 429 | Q | A | -2.6080 | |
| 430 | F | A | -1.4170 | |
| 431 | A | A | -0.8948 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5809 | |
| 435 | K | A | -0.7135 | |
| 436 | F | A | 0.1449 | |
| 437 | L | A | 1.0282 | |
| 438 | Y | A | 0.8236 | |
| 439 | Q | A | -0.2790 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine