| Chain sequence(s) |
A: GKITLYEDRGFQGRYECSSDPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDADQQWMGLSDSVRSCRLIPSGSRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEISLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:33)
[INFO] Main: Simulation completed successfully. (00:01:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5954 | |
| 2 | K | A | -2.4015 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | -1.3557 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -1.8606 | |
| 7 | E | A | -2.5023 | |
| 8 | D | A | -3.1236 | |
| 9 | R | A | -3.0117 | |
| 10 | G | A | -1.8292 | |
| 11 | F | A | -1.8469 | |
| 12 | Q | A | -2.6852 | |
| 13 | G | A | -2.5769 | |
| 14 | R | A | -2.3550 | |
| 16 | Y | A | -0.2331 | |
| 17 | E | A | -1.6614 | |
| 18 | C | A | -1.4913 | |
| 19 | S | A | -1.7590 | |
| 20 | S | A | -1.6720 | |
| 21 | D | A | -2.2115 | |
| 23 | P | A | -1.7661 | |
| 24 | N | A | -1.6584 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.2856 | |
| 27 | P | A | -0.4561 | |
| 28 | Y | A | 0.5103 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -0.9670 | |
| 31 | R | A | -1.8830 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | -2.3654 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.6824 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.4382 | |
| 39 | S | A | -2.6128 | |
| 40 | G | A | -1.7835 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.0533 | |
| 47 | Q | A | -1.3965 | |
| 48 | P | A | -1.5994 | |
| 49 | N | A | -1.7907 | |
| 50 | Y | A | -0.9333 | |
| 51 | S | A | -0.9742 | |
| 52 | G | A | -0.7626 | |
| 53 | L | A | 0.0105 | |
| 54 | Q | A | -0.0037 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.1336 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -2.1113 | |
| 59 | R | A | -3.5334 | |
| 60 | G | A | -2.8511 | |
| 61 | D | A | -3.0931 | |
| 63 | A | A | -1.8640 | |
| 64 | D | A | -1.9814 | |
| 66 | Q | A | -1.8035 | |
| 67 | Q | A | -1.8774 | |
| 68 | W | A | -0.7335 | |
| 69 | M | A | -0.1985 | |
| 70 | G | A | -0.3669 | |
| 71 | L | A | 0.9005 | |
| 72 | S | A | -0.4474 | |
| 73 | D | A | -2.0801 | |
| 74 | S | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.6910 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -1.3738 | |
| 80 | L | A | -0.8927 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.2728 | |
| 84 | S | A | -0.8551 | |
| 85 | G | A | -0.7039 | |
| 86 | S | A | -0.9383 | |
| 88 | R | A | -1.6435 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -0.9933 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | 0.0000 | |
| 93 | E | A | -2.4677 | |
| 94 | R | A | -3.7837 | |
| 95 | E | A | -4.0845 | |
| 96 | D | A | -3.6935 | |
| 97 | Y | A | -2.8074 | |
| 98 | R | A | -3.3874 | |
| 99 | G | A | -2.4292 | |
| 100 | Q | A | -1.4185 | |
| 101 | M | A | -0.6881 | |
| 102 | I | A | -0.6947 | |
| 103 | E | A | -1.3021 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -1.9365 | |
| 106 | E | A | -3.0946 | |
| 107 | D | A | -3.0202 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.3710 | |
| 110 | C | A | -1.2583 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.2293 | |
| 113 | D | A | -3.0340 | |
| 114 | R | A | -3.0655 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -2.6219 | |
| 117 | F | A | -1.5206 | |
| 118 | N | A | -1.8737 | |
| 119 | E | A | -2.7785 | |
| 120 | I | A | 0.0000 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.1552 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -0.0900 | |
| 127 | E | A | -0.6444 | |
| 128 | G | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.4574 | |
| 135 | L | A | -0.8909 | |
| 136 | S | A | -0.9069 | |
| 137 | N | A | -1.6740 | |
| 138 | Y | A | -1.3847 | |
| 139 | R | A | -2.1318 | |
| 140 | G | A | -1.4997 | |
| 141 | R | A | -1.4239 | |
| 142 | Q | A | 0.0000 | |
| 143 | Y | A | -0.0678 | |
| 144 | L | A | 0.1883 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | 0.0078 | |
| 147 | P | A | -0.4634 | |
| 148 | G | A | -0.9772 | |
| 149 | D | A | -2.2777 | |
| 150 | Y | A | -2.2667 | |
| 151 | R | A | -3.2703 | |
| 152 | R | A | -3.4106 | |
| 153 | Y | A | -2.1795 | |
| 154 | Q | A | -2.2104 | |
| 155 | D | A | -2.1264 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.2940 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.8937 | |
| 160 | N | A | -1.4800 | |
| 161 | A | A | -1.8868 | |
| 162 | R | A | -1.9731 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.7633 | |
| 168 | R | A | -1.7360 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | -0.5845 | |
| 171 | D | A | -1.2083 | |
| 172 | F | A | 0.7290 | |
| 173 | S | A | 0.3308 |