Project name: Pep5-Mut11-KLVFF

Status: done

Started: 2026-02-11 06:36:20
Settings
Chain sequence(s) A: RGDGWKPFVIDATVLVALGTHIGVIKLVFF
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-1.954
Maximal score value
2.6309
Average score
0.58
Total score value
17.4003

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -1.9261
2 G A -1.1209
3 D A -1.9540
4 G A -0.5613
5 W A 0.8432
6 K A -1.3233
7 P A -0.1784
8 F A 2.1391
9 V A 2.0122
10 I A 1.9040
11 D A -1.4030
12 A A -0.2970
13 T A 0.1549
14 V A 1.4153
15 L A 2.1116
16 V A 2.0888
17 A A 0.6881
18 L A 1.4832
19 G A -0.1218
20 T A -0.3282
21 H A -0.6223
22 I A 1.7639
23 G A 0.3470
24 V A 1.6970
25 I A 0.8984
26 K A -1.2356
27 L A 1.5656
28 V A 2.4418
29 F A 2.6309
30 F A 2.2872
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Laboratory of Theory of Biopolymers 2018