Project name: query_structure

Status: done

Started: 2026-03-16 19:54:55
Settings
Chain sequence(s) A: AIPCGESCVWIPCISAAIGCSCKNKVCYR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-2.2545
Maximal score value
2.3968
Average score
0.2697
Total score value
7.8208

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.3188
2 I A 1.3547
3 P A 0.2392
4 C A 0.3364
5 G A -0.2140
6 E A 0.1321
7 S A 0.1513
8 C A 0.6976
9 V A 0.9824
10 W A 2.0302
11 I A 2.3968
12 P A 1.4581
13 C A 0.0000
14 I A 2.3867
15 S A 1.2835
16 A A 1.0035
17 A A 1.3834
18 I A 1.8624
19 G A 0.2517
20 C A 0.0000
21 S A -0.5700
22 C A -0.8048
23 K A -2.0588
24 N A -2.2545
25 K A -1.7233
26 V A -1.1286
27 C A 0.0000
28 Y A -0.6955
29 R A -0.9985
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Laboratory of Theory of Biopolymers 2018