| Chain sequence(s) |
A: TPLPPYPATQKVLQDPQSGQYFVFDVPLQVKIKTFYDPETGKYVKVSVPSSEEASSEPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1247 | T | A | 0.2238 | |
| 1248 | P | A | 0.3593 | |
| 1249 | L | A | 1.3551 | |
| 1250 | P | A | 0.4913 | |
| 1251 | P | A | 0.3403 | |
| 1252 | Y | A | 1.0758 | |
| 1253 | P | A | 0.1274 | |
| 1254 | A | A | 0.0881 | |
| 1255 | T | A | -0.3136 | |
| 1256 | Q | A | -1.0271 | |
| 1257 | K | A | -0.8741 | |
| 1258 | V | A | 1.3053 | |
| 1259 | L | A | 1.7805 | |
| 1260 | Q | A | -0.0186 | |
| 1261 | D | A | -0.8444 | |
| 1262 | P | A | -1.2408 | |
| 1263 | Q | A | -1.9042 | |
| 1264 | S | A | -1.4067 | |
| 1265 | G | A | -1.1723 | |
| 1266 | Q | A | -0.6726 | |
| 1267 | Y | A | 1.6623 | |
| 1268 | F | A | 2.3753 | |
| 1269 | V | A | 2.8132 | |
| 1270 | F | A | 2.3756 | |
| 1271 | D | A | -0.2314 | |
| 1272 | V | A | 0.8494 | |
| 1273 | P | A | 0.3172 | |
| 1274 | L | A | 0.4437 | |
| 1275 | Q | A | -0.5780 | |
| 1276 | V | A | -0.1946 | |
| 1277 | K | A | -1.0210 | |
| 1278 | I | A | 0.0531 | |
| 1279 | K | A | -0.3986 | |
| 1280 | T | A | 0.2507 | |
| 1281 | F | A | 1.6168 | |
| 1282 | Y | A | 1.3136 | |
| 1283 | D | A | -0.3372 | |
| 1284 | P | A | -1.2311 | |
| 1285 | E | A | -2.3369 | |
| 1286 | T | A | -1.3893 | |
| 1287 | G | A | -1.2888 | |
| 1288 | K | A | -1.1042 | |
| 1289 | Y | A | 1.1473 | |
| 1290 | V | A | 0.9570 | |
| 1291 | K | A | -0.2097 | |
| 1292 | V | A | 0.4554 | |
| 1293 | S | A | -0.0495 | |
| 1294 | V | A | 0.2629 | |
| 1295 | P | A | -0.2835 | |
| 1296 | S | A | -1.2346 | |
| 1297 | S | A | -1.9085 | |
| 1298 | E | A | -2.9191 | |
| 1299 | E | A | -2.8250 | |
| 1300 | A | A | -1.4227 | |
| 1301 | S | A | -1.3220 | |
| 1302 | S | A | -1.2674 | |
| 1303 | E | A | -2.1565 | |
| 1304 | P | A | -1.3195 | |
| 1305 | P | A | -0.8656 |