| Chain sequence(s) |
A: SCEEKLKQLLEYYNIFLE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:26)
[INFO] Main: Simulation completed successfully. (00:00:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.5337 | |
| 2 | C | A | -1.3626 | |
| 3 | E | A | -3.0004 | |
| 4 | E | A | -3.6236 | |
| 5 | K | A | -2.9473 | |
| 6 | L | A | -1.3636 | |
| 7 | K | A | -2.5621 | |
| 8 | Q | A | -1.8679 | |
| 9 | L | A | 0.1014 | |
| 10 | L | A | 0.9894 | |
| 11 | E | A | -0.4103 | |
| 12 | Y | A | 2.0273 | |
| 13 | Y | A | 2.3996 | |
| 14 | N | A | 1.0666 | |
| 15 | I | A | 2.7005 | |
| 16 | F | A | 3.2999 | |
| 17 | L | A | 2.2790 | |
| 18 | E | A | 0.0210 |