| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWAKRPGAFDSFLIQYQESEKVGEATVLTVPGSCRSYDLTGLKPGTEYTVSIYGVDVKYDIDSRPISSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.7061 | |
| 2 | P | A | -0.4823 | |
| 3 | A | A | -0.8168 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.3878 | |
| 6 | N | A | -1.5832 | |
| 7 | L | A | -0.3719 | |
| 8 | V | A | 1.1279 | |
| 9 | V | A | 0.6475 | |
| 10 | S | A | -0.6049 | |
| 11 | R | A | -2.0082 | |
| 12 | V | A | -1.0430 | |
| 13 | T | A | -1.7986 | |
| 14 | E | A | -3.0510 | |
| 15 | D | A | -2.7673 | |
| 16 | S | A | -2.0890 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2087 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.6193 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -1.7763 | |
| 23 | K | A | -2.2973 | |
| 24 | R | A | -2.4669 | |
| 25 | P | A | -1.4696 | |
| 26 | G | A | -1.5378 | |
| 27 | A | A | -1.2488 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -1.7407 | |
| 30 | S | A | -0.6252 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.8916 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | 0.5870 | |
| 35 | Y | A | 0.3522 | |
| 36 | Q | A | -0.7942 | |
| 37 | E | A | -1.7578 | |
| 38 | S | A | -1.3928 | |
| 39 | E | A | -2.4402 | |
| 40 | K | A | -1.7033 | |
| 41 | V | A | 0.1287 | |
| 42 | G | A | -0.9863 | |
| 43 | E | A | -1.8891 | |
| 44 | A | A | -0.5356 | |
| 45 | T | A | 0.2582 | |
| 46 | V | A | 1.6043 | |
| 47 | L | A | 1.2415 | |
| 48 | T | A | 0.5940 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.8697 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.1152 | |
| 53 | C | A | -1.0435 | |
| 54 | R | A | -1.7762 | |
| 55 | S | A | -1.0097 | |
| 56 | Y | A | -0.8700 | |
| 57 | D | A | -1.6641 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3640 | |
| 60 | G | A | -1.5040 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0153 | |
| 63 | P | A | -2.5712 | |
| 64 | G | A | -1.8504 | |
| 65 | T | A | -2.2214 | |
| 66 | E | A | -1.8485 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | 0.1089 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.1831 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.0573 | |
| 75 | D | A | -0.3708 | |
| 76 | V | A | 0.4495 | |
| 77 | K | A | -0.5457 | |
| 78 | Y | A | 0.1630 | |
| 79 | D | A | -0.3122 | |
| 80 | I | A | 0.7378 | |
| 81 | D | A | -1.2986 | |
| 82 | S | A | -0.8729 | |
| 83 | R | A | -1.6053 | |
| 84 | P | A | -0.6812 | |
| 85 | I | A | 0.1110 | |
| 86 | S | A | -0.0594 | |
| 87 | S | A | 0.0000 | |
| 88 | N | A | -1.0273 | |
| 89 | P | A | -0.7021 | |
| 90 | L | A | -0.5520 | |
| 91 | S | A | 0.3705 | |
| 92 | A | A | 1.2344 | |
| 93 | I | A | 1.8420 | |
| 94 | F | A | 0.0000 | |
| 95 | T | A | -0.8059 | |
| 96 | T | A | -1.9431 |