Project name: query_structure

Status: done

Started: 2026-03-16 22:49:42
Settings
Chain sequence(s) C: LHGTEVVVAGWVASLGDYGRVKIVKVSDRGGAAVPVYLEAGKTPDHLFKVFAELSREDVVVIKGIVEASKGVGRGVEIFPSEIWILNKA
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:18)
Show buried residues

Minimal score value
-2.9023
Maximal score value
1.7111
Average score
-0.7259
Total score value
-64.6065

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
16 L C 0.9964
17 H C -0.6205
18 G C -0.8289
19 T C -0.9860
20 E C -1.5155
21 V C 0.4564
22 V C 1.5645
23 V C 1.0986
24 A C 0.7154
25 G C -0.7818
26 W C -1.3416
27 V C 0.0000
28 A C -1.3250
29 S C -0.7773
30 L C -0.3645
31 G C -0.3771
32 D C -1.3888
33 Y C -0.3124
34 G C -1.3169
35 R C -2.4434
36 V C -1.3838
37 K C -0.7987
38 I C -0.0418
39 V C 0.0000
40 K C -0.7184
41 V C 0.0000
42 S C 0.0000
43 D C -2.7697
44 R C -2.9023
45 G C -1.7035
46 G C -1.4117
47 A C -0.8466
48 A C -0.4977
49 V C 0.0759
50 P C 0.0605
51 V C 0.0000
52 Y C -0.1976
53 L C 0.0000
54 E C -2.1051
55 A C -2.0692
56 G C -2.0685
57 K C -2.6208
58 T C 0.0000
59 P C -1.9118
60 D C -2.8708
61 H C -2.3090
62 L C 0.0000
63 F C -1.4731
64 K C -2.3479
65 V C -1.2428
66 F C -0.9140
67 A C -1.2971
68 E C -1.9318
69 L C 0.0000
70 S C -1.7775
71 R C -2.7720
72 E C -2.7654
73 D C -1.5321
74 V C -0.0748
75 V C 0.0000
76 V C 1.3615
77 I C 0.0000
78 K C -0.1286
79 G C 0.0000
80 I C -0.5537
81 V C 0.0041
82 E C -0.9116
83 A C -0.9013
84 S C -1.1512
85 K C -1.9011
86 G C -0.8325
87 V C 0.5408
88 G C -0.9057
89 R C -1.8556
90 G C -0.9205
91 V C 0.2541
92 E C 0.1063
93 I C 0.0000
94 F C -0.5102
95 P C 0.0000
96 S C -1.3224
97 E C -0.6574
98 I C 0.0000
99 W C 1.3869
100 I C 1.5643
101 L C 1.7111
102 N C -0.3204
103 K C -1.3724
104 A C -0.5235
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Laboratory of Theory of Biopolymers 2018