| Chain sequence(s) |
B: GPLEALRRALAEEMRARMEEMAALVAELFGEETAEEFRKRMKAMIERLEK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.2499 | |
| 2 | P | B | 0.2473 | |
| 3 | L | B | 0.8808 | |
| 4 | E | B | -0.9696 | |
| 5 | A | B | -0.0830 | |
| 6 | L | B | 0.7905 | |
| 7 | R | B | -1.1956 | |
| 8 | R | B | -2.2269 | |
| 9 | A | B | -1.2378 | |
| 10 | L | B | -1.1786 | |
| 11 | A | B | 0.0000 | |
| 12 | E | B | -3.4829 | |
| 13 | E | B | -3.5190 | |
| 14 | M | B | -3.0411 | |
| 15 | R | B | -3.9569 | |
| 16 | A | B | -3.3581 | |
| 17 | R | B | -3.9865 | |
| 18 | M | B | 0.0000 | |
| 19 | E | B | -3.3232 | |
| 20 | E | B | -2.9668 | |
| 21 | M | B | -1.5009 | |
| 22 | A | B | 0.0000 | |
| 23 | A | B | -0.8472 | |
| 24 | L | B | 0.7324 | |
| 25 | V | B | 0.0876 | |
| 26 | A | B | -0.7380 | |
| 27 | E | B | -0.3078 | |
| 28 | L | B | 1.7858 | |
| 29 | F | B | 1.6938 | |
| 30 | G | B | -0.7225 | |
| 31 | E | B | -2.9012 | |
| 32 | E | B | -3.3144 | |
| 33 | T | B | -2.0354 | |
| 34 | A | B | 0.0000 | |
| 35 | E | B | -4.3476 | |
| 36 | E | B | -4.0633 | |
| 37 | F | B | -3.1312 | |
| 38 | R | B | -4.1010 | |
| 39 | K | B | -4.2768 | |
| 40 | R | B | -3.9145 | |
| 41 | M | B | -3.2937 | |
| 42 | K | B | -3.8339 | |
| 43 | A | B | -2.8500 | |
| 44 | M | B | -2.0818 | |
| 45 | I | B | 0.0000 | |
| 46 | E | B | -3.8201 | |
| 47 | R | B | -3.3596 | |
| 48 | L | B | -2.3905 | |
| 49 | E | B | -3.1616 | |
| 50 | K | B | -3.3535 |