Project name: query_structure

Status: done

Started: 2026-03-16 23:48:39
Settings
Chain sequence(s) A: ILPPSSTSCGPLITATNMSNMCGTHAACCACCLSGICENMSPCLAAGEE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-2.9293
Maximal score value
2.6832
Average score
-0.0978
Total score value
-4.7936

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 2.6832
2 L A 2.2991
3 P A 0.7815
4 P A 0.0940
5 S A -0.3837
6 S A -0.7903
7 T A -0.5380
8 S A -0.5794
9 C A 0.2822
10 G A 0.0545
11 P A 0.6390
12 L A 1.1630
13 I A 2.0556
14 T A 0.8008
15 A A 0.3583
16 T A -0.4228
17 N A -0.9633
18 M A -0.3430
19 S A -0.9152
20 N A -1.8138
21 M A -1.0573
22 C A -0.7089
23 G A -0.9752
24 T A -0.6894
25 H A -0.9632
26 A A -0.2649
27 A A -0.2893
28 C A 0.0000
29 C A 0.0000
30 A A 0.8347
31 C A 0.9010
32 C A 0.0000
33 L A 1.7652
34 S A 0.8678
35 G A 0.5556
36 I A 1.6663
37 C A 0.2281
38 E A -1.4545
39 N A -0.8621
40 M A 0.0000
41 S A -0.3241
42 P A -0.2481
43 C A 0.0000
44 L A 0.2407
45 A A -0.1235
46 A A -0.8539
47 G A -1.7192
48 E A -2.8518
49 E A -2.9293
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018