Project name: 78d6e0fcbf06c01

Status: done

Started: 2024-12-20 12:05:05
Settings
Chain sequence(s) T: AAAAAAAAAAAAISCRASQDISNYLNWYAAAAAAAAALLIYYTSRLHSEVPSRFSGSGSGTDYSLTIAAAAAAAAAAAFCQQGKTLPWTFGGGTKL
input PDB
Selected Chain(s) T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with T chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.97
Maximal score value
1.5914
Average score
-0.1843
Total score value
-17.6908

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
9 A T -0.0975
10 A T 0.0139
11 A T 0.0814
12 A T 0.1590
13 A T 0.1633
14 A T 0.1828
15 A T 0.1693
16 A T 0.1645
17 A T 0.1673
18 A T 0.1919
19 A T 0.2208
20 A T 0.2014
21 I T 0.1624
22 S T -0.6801
23 C T -1.1575
24 R T -2.6017
25 A T -1.9696
26 S T -1.4638
27 Q T -2.3107
28 D T -2.9700
29 I T 0.0000
36 S T -0.7622
37 N T -0.5312
38 Y T 0.5559
39 L T 0.0000
40 N T 0.4416
41 W T 0.0000
42 Y T 0.7356
43 A T 0.5322
44 A T 0.4813
45 A T 0.3191
46 A T 0.1807
47 A T 0.1616
48 A T 0.1798
49 A T 0.2039
50 A T 0.2894
51 A T 0.3063
52 L T 0.4294
53 L T -0.1849
54 I T 0.0000
55 Y T 0.4307
56 Y T 0.9378
57 T T 0.0000
65 S T -0.7060
66 R T -1.5807
67 L T -1.1398
68 H T -1.2136
69 S T -1.4816
70 E T -1.9070
71 V T -1.0144
72 P T -1.1094
74 S T -1.4444
75 R T -1.5785
76 F T -0.7060
77 S T -0.8132
78 G T -0.4829
79 S T -0.7551
80 G T -0.8462
83 S T -1.0499
84 G T -1.6270
85 T T -2.1476
86 D T -1.8694
87 Y T 0.0000
88 S T -0.5256
89 L T 0.0000
90 T T 0.0261
91 I T 0.2543
92 A T -0.0756
93 A T -0.0023
94 A T 0.2213
95 A T 0.3803
96 A T 0.4201
97 A T 0.4722
98 A T 0.3898
99 A T 0.2486
100 A T 0.2269
101 A T 0.1337
102 A T 0.4061
103 F T 0.8107
104 C T 0.0000
105 Q T 0.6703
106 Q T 0.4299
107 G T 0.4122
108 K T -0.6376
109 T T 0.5578
114 L T 1.5397
115 P T 1.2331
116 W T 1.5914
117 T T 1.1491
118 F T 1.3921
119 G T -0.0044
120 G T -0.0667
121 G T -0.2559
122 T T -0.0019
123 K T 0.1110
124 L T 0.9411
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Laboratory of Theory of Biopolymers 2018