| Chain sequence(s) |
B: MSEAEKLVEEAKPYFEQAVNMPGVNFSVFWFYFDDYWEYVEKLLRRPLPKETQRALWSLGFEYQEQFRKKQGM
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:08)
[INFO] Main: Simulation completed successfully. (00:02:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | -0.1931 | |
| 2 | S | B | -1.6194 | |
| 3 | E | B | -3.0801 | |
| 4 | A | B | 0.0000 | |
| 5 | E | B | -3.5486 | |
| 6 | K | B | -3.8123 | |
| 7 | L | B | 0.0000 | |
| 8 | V | B | -2.6210 | |
| 9 | E | B | -3.8332 | |
| 10 | E | B | -3.0678 | |
| 11 | A | B | 0.0000 | |
| 12 | K | B | -2.3093 | |
| 13 | P | B | -1.8320 | |
| 14 | Y | B | -1.1626 | |
| 15 | F | B | 0.0000 | |
| 16 | E | B | -2.3016 | |
| 17 | Q | B | -2.1478 | |
| 18 | A | B | 0.0000 | |
| 19 | V | B | 0.0000 | |
| 20 | N | B | -2.2327 | |
| 21 | M | B | -1.1174 | |
| 22 | P | B | -1.0139 | |
| 23 | G | B | -0.9053 | |
| 24 | V | B | 0.0000 | |
| 25 | N | B | -0.7103 | |
| 26 | F | B | 0.1426 | |
| 27 | S | B | 0.7073 | |
| 28 | V | B | 1.0368 | |
| 29 | F | B | 0.0000 | |
| 30 | W | B | 0.8627 | |
| 31 | F | B | 1.2702 | |
| 32 | Y | B | 0.3872 | |
| 33 | F | B | 0.0000 | |
| 34 | D | B | -1.8517 | |
| 35 | D | B | -2.0907 | |
| 36 | Y | B | 0.0000 | |
| 37 | W | B | -1.7903 | |
| 38 | E | B | -2.8311 | |
| 39 | Y | B | -1.6219 | |
| 40 | V | B | 0.0000 | |
| 41 | E | B | -2.4442 | |
| 42 | K | B | -2.7555 | |
| 43 | L | B | -1.0923 | |
| 44 | L | B | -1.6568 | |
| 45 | R | B | -2.8921 | |
| 46 | R | B | -2.7279 | |
| 47 | P | B | -2.1314 | |
| 48 | L | B | 0.0000 | |
| 49 | P | B | -2.1141 | |
| 50 | K | B | -3.3007 | |
| 51 | E | B | -3.8358 | |
| 52 | T | B | 0.0000 | |
| 53 | Q | B | -2.4706 | |
| 54 | R | B | -3.0046 | |
| 55 | A | B | -1.9711 | |
| 56 | L | B | 0.0000 | |
| 57 | W | B | -0.2222 | |
| 58 | S | B | -0.4801 | |
| 59 | L | B | 0.0000 | |
| 60 | G | B | 0.0000 | |
| 61 | F | B | 0.1932 | |
| 62 | E | B | -1.8033 | |
| 63 | Y | B | 0.0000 | |
| 64 | Q | B | -2.1394 | |
| 65 | E | B | -3.6551 | |
| 66 | Q | B | -3.6838 | |
| 67 | F | B | 0.0000 | |
| 68 | R | B | -3.9934 | |
| 69 | K | B | -4.1389 | |
| 70 | K | B | -3.9337 | |
| 71 | Q | B | -2.9411 | |
| 72 | G | B | -1.8547 | |
| 73 | M | B | -0.9848 |