Project name: HY0001

Status: done

Started: 2025-12-29 08:25:19
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGRSLRLSCTTSGLTFTHYHMSWVRQAPGKGLEWVAIIRNKAYGYTTDYSASVRGRFTISRDDSKSILYLQMNSLKTEDTAVYYCVREGGYGYDGTFAYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASESVDNYGISFMNWFQQKPGQAPKLLIYAASNQGSGVPSRFSGSGSGTDFTLTISSMQPEDFATYYCQQSKEVPRTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:48)
Show buried residues

Minimal score value
-2.914
Maximal score value
1.5468
Average score
-0.5647
Total score value
-132.1402

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9833
2 V H -0.9041
3 Q H -0.9155
4 L H 0.0000
5 V H 0.7902
6 E H 0.0000
7 S H -0.2453
8 G H -0.4980
9 G H 0.1620
11 G H 0.8113
12 L H 1.4379
13 V H 0.0000
14 Q H -1.2783
15 P H -2.0317
16 G H -2.1119
17 R H -2.6378
18 S H -1.7740
19 L H -1.1211
20 R H -1.7077
21 L H 0.0000
22 S H -0.2936
23 C H 0.0000
24 T H 0.0173
25 T H 0.0000
26 S H -0.7693
27 G H -1.0768
28 L H -0.4454
29 T H -0.3220
30 F H 0.0000
35 T H -1.3231
36 H H -1.3609
37 Y H -0.6819
38 H H -0.6067
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6321
45 A H -1.0384
46 P H -0.8003
47 G H -1.4581
48 K H -2.2685
49 G H -1.4536
50 L H 0.0000
51 E H -0.9701
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 I H 0.0000
56 I H 0.0000
57 R H -0.8007
58 N H -1.1832
59 K H -1.7551
60 A H -0.4906
61 Y H 0.3638
62 G H -0.3917
63 Y H -0.3529
64 T H -0.2229
65 T H -0.1891
66 D H -0.3826
67 Y H -0.4747
68 S H 0.0000
69 A H -0.7593
70 S H -0.9131
71 V H 0.0000
72 R H -1.9375
74 G H -1.4620
75 R H -1.4630
76 F H 0.0000
77 T H -0.8944
78 I H 0.0000
79 S H -0.3118
80 R H -0.6819
81 D H -1.1352
82 D H -1.5806
83 S H -1.3205
84 K H -2.0048
85 S H -1.1145
86 I H -0.4179
87 L H 0.0000
88 Y H -0.4256
89 L H 0.0000
90 Q H -1.1654
91 M H 0.0000
92 N H -1.8007
93 S H -1.7718
94 L H 0.0000
95 K H -2.6573
96 T H -1.8221
97 E H -2.3637
98 D H 0.0000
99 T H -0.4679
100 A H 0.0000
101 V H 0.7431
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 V H 0.0000
106 R H 0.0000
107 E H 0.1253
108 G H 0.0000
109 G H 0.3840
110 Y H 1.2610
111 G H 0.5152
112A Y H 0.9390
112 D H 0.4280
113 G H 0.0981
114 T H 0.0000
115 F H 0.0000
116 A H 0.1947
117 Y H 0.4619
118 W H -0.0363
119 G H 0.0000
120 Q H -1.1160
121 G H -0.1844
122 T H 0.5507
123 L H 1.5468
124 V H 0.0000
125 T H 0.3249
126 V H 0.0000
127 S H -0.5006
128 S H -0.3489
1 D L -2.4719
2 I L 0.0000
3 Q L -2.4386
4 M L 0.0000
5 T L -1.4307
6 Q L -1.1694
7 S L -0.7298
8 P L -0.5458
9 S L -0.7819
10 S L -0.9678
11 L L -0.7141
12 S L -0.8765
13 A L 0.0000
14 S L -0.8143
15 V L 0.0757
16 G L -0.6812
17 D L -1.7708
18 R L -2.3114
19 V L 0.0000
20 T L -0.6239
21 I L 0.0000
22 T L -0.8881
23 C L 0.0000
24 R L -2.9140
25 A L 0.0000
26 S L -2.3465
27 E L -2.7792
28 S L -1.7099
29 V L 0.0000
30 D L -0.8301
31 N L -0.2321
34 Y L 0.9172
35 G L 0.1701
36 I L 0.4461
37 S L -0.1478
38 F L -0.0964
39 M L 0.0000
40 N L 0.0000
41 W L 0.0000
42 F L 0.0000
43 Q L 0.0000
44 Q L -0.9885
45 K L -1.3371
46 P L -0.9270
47 G L -1.4223
48 Q L -2.0077
49 A L -1.2383
50 P L 0.0000
51 K L -1.0274
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.0611
56 A L -0.1113
57 A L 0.0000
65 S L -0.6782
66 N L -0.8783
67 Q L -1.1536
68 G L 0.0000
69 S L -0.7074
70 G L -0.6442
71 V L -0.6303
72 P L -0.4950
74 S L -0.6033
75 R L -0.8363
76 F L 0.0000
77 S L -0.6322
78 G L -0.5905
79 S L -0.7428
80 G L -1.0968
83 S L -1.0290
84 G L -1.3133
85 T L -1.9480
86 D L -2.0651
87 F L 0.0000
88 T L -0.7745
89 L L 0.0000
90 T L -0.5970
91 I L 0.0000
92 S L -1.2451
93 S L -1.1175
94 M L 0.0000
95 Q L -0.8543
96 P L -0.9625
97 E L -1.5946
98 D L 0.0000
99 F L -0.3239
100 A L 0.0000
101 T L -0.7972
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L 0.0000
108 K L -1.0865
109 E L -1.5528
114 V L -0.1438
115 P L 0.0000
116 R L -0.8302
117 T L -0.9353
118 F L 0.0000
119 G L 0.0000
120 G L -1.2276
121 G L -0.9892
122 T L 0.0000
123 K L -1.5141
124 V L 0.0000
125 E L -1.2710
126 I L -0.5605
127 K L -1.4795
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Laboratory of Theory of Biopolymers 2018