| Chain sequence(s) |
H: EVQLVESGGGLVQPGRSLRLSCTTSGLTFTHYHMSWVRQAPGKGLEWVAIIRNKAYGYTTDYSASVRGRFTISRDDSKSILYLQMNSLKTEDTAVYYCVREGGYGYDGTFAYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASESVDNYGISFMNWFQQKPGQAPKLLIYAASNQGSGVPSRFSGSGSGTDFTLTISSMQPEDFATYYCQQSKEVPRTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9833 | |
| 2 | V | H | -0.9041 | |
| 3 | Q | H | -0.9155 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7902 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2453 | |
| 8 | G | H | -0.4980 | |
| 9 | G | H | 0.1620 | |
| 11 | G | H | 0.8113 | |
| 12 | L | H | 1.4379 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.2783 | |
| 15 | P | H | -2.0317 | |
| 16 | G | H | -2.1119 | |
| 17 | R | H | -2.6378 | |
| 18 | S | H | -1.7740 | |
| 19 | L | H | -1.1211 | |
| 20 | R | H | -1.7077 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2936 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | 0.0173 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -0.7693 | |
| 27 | G | H | -1.0768 | |
| 28 | L | H | -0.4454 | |
| 29 | T | H | -0.3220 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.3231 | |
| 36 | H | H | -1.3609 | |
| 37 | Y | H | -0.6819 | |
| 38 | H | H | -0.6067 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6321 | |
| 45 | A | H | -1.0384 | |
| 46 | P | H | -0.8003 | |
| 47 | G | H | -1.4581 | |
| 48 | K | H | -2.2685 | |
| 49 | G | H | -1.4536 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9701 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | I | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -0.8007 | |
| 58 | N | H | -1.1832 | |
| 59 | K | H | -1.7551 | |
| 60 | A | H | -0.4906 | |
| 61 | Y | H | 0.3638 | |
| 62 | G | H | -0.3917 | |
| 63 | Y | H | -0.3529 | |
| 64 | T | H | -0.2229 | |
| 65 | T | H | -0.1891 | |
| 66 | D | H | -0.3826 | |
| 67 | Y | H | -0.4747 | |
| 68 | S | H | 0.0000 | |
| 69 | A | H | -0.7593 | |
| 70 | S | H | -0.9131 | |
| 71 | V | H | 0.0000 | |
| 72 | R | H | -1.9375 | |
| 74 | G | H | -1.4620 | |
| 75 | R | H | -1.4630 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8944 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3118 | |
| 80 | R | H | -0.6819 | |
| 81 | D | H | -1.1352 | |
| 82 | D | H | -1.5806 | |
| 83 | S | H | -1.3205 | |
| 84 | K | H | -2.0048 | |
| 85 | S | H | -1.1145 | |
| 86 | I | H | -0.4179 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4256 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1654 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.8007 | |
| 93 | S | H | -1.7718 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6573 | |
| 96 | T | H | -1.8221 | |
| 97 | E | H | -2.3637 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4679 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7431 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | E | H | 0.1253 | |
| 108 | G | H | 0.0000 | |
| 109 | G | H | 0.3840 | |
| 110 | Y | H | 1.2610 | |
| 111 | G | H | 0.5152 | |
| 112A | Y | H | 0.9390 | |
| 112 | D | H | 0.4280 | |
| 113 | G | H | 0.0981 | |
| 114 | T | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | A | H | 0.1947 | |
| 117 | Y | H | 0.4619 | |
| 118 | W | H | -0.0363 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1160 | |
| 121 | G | H | -0.1844 | |
| 122 | T | H | 0.5507 | |
| 123 | L | H | 1.5468 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3249 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5006 | |
| 128 | S | H | -0.3489 | |
| 1 | D | L | -2.4719 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.4386 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.4307 | |
| 6 | Q | L | -1.1694 | |
| 7 | S | L | -0.7298 | |
| 8 | P | L | -0.5458 | |
| 9 | S | L | -0.7819 | |
| 10 | S | L | -0.9678 | |
| 11 | L | L | -0.7141 | |
| 12 | S | L | -0.8765 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.8143 | |
| 15 | V | L | 0.0757 | |
| 16 | G | L | -0.6812 | |
| 17 | D | L | -1.7708 | |
| 18 | R | L | -2.3114 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6239 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8881 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.9140 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.3465 | |
| 27 | E | L | -2.7792 | |
| 28 | S | L | -1.7099 | |
| 29 | V | L | 0.0000 | |
| 30 | D | L | -0.8301 | |
| 31 | N | L | -0.2321 | |
| 34 | Y | L | 0.9172 | |
| 35 | G | L | 0.1701 | |
| 36 | I | L | 0.4461 | |
| 37 | S | L | -0.1478 | |
| 38 | F | L | -0.0964 | |
| 39 | M | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9885 | |
| 45 | K | L | -1.3371 | |
| 46 | P | L | -0.9270 | |
| 47 | G | L | -1.4223 | |
| 48 | Q | L | -2.0077 | |
| 49 | A | L | -1.2383 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0274 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0611 | |
| 56 | A | L | -0.1113 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6782 | |
| 66 | N | L | -0.8783 | |
| 67 | Q | L | -1.1536 | |
| 68 | G | L | 0.0000 | |
| 69 | S | L | -0.7074 | |
| 70 | G | L | -0.6442 | |
| 71 | V | L | -0.6303 | |
| 72 | P | L | -0.4950 | |
| 74 | S | L | -0.6033 | |
| 75 | R | L | -0.8363 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6322 | |
| 78 | G | L | -0.5905 | |
| 79 | S | L | -0.7428 | |
| 80 | G | L | -1.0968 | |
| 83 | S | L | -1.0290 | |
| 84 | G | L | -1.3133 | |
| 85 | T | L | -1.9480 | |
| 86 | D | L | -2.0651 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7745 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5970 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2451 | |
| 93 | S | L | -1.1175 | |
| 94 | M | L | 0.0000 | |
| 95 | Q | L | -0.8543 | |
| 96 | P | L | -0.9625 | |
| 97 | E | L | -1.5946 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3239 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7972 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | K | L | -1.0865 | |
| 109 | E | L | -1.5528 | |
| 114 | V | L | -0.1438 | |
| 115 | P | L | 0.0000 | |
| 116 | R | L | -0.8302 | |
| 117 | T | L | -0.9353 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.2276 | |
| 121 | G | L | -0.9892 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5141 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2710 | |
| 126 | I | L | -0.5605 | |
| 127 | K | L | -1.4795 |