| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFKIGYWEWRKYGEAIELNVPGSERSYDLTGLKPGTEYRVLIYGVKGGAGSHPLRALFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9161 | |
| 2 | L | A | 0.3158 | |
| 3 | P | A | -0.3670 | |
| 4 | A | A | -0.7079 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.9889 | |
| 7 | N | A | -1.5182 | |
| 8 | L | A | -0.3884 | |
| 9 | V | A | 0.9230 | |
| 10 | V | A | 0.5249 | |
| 11 | S | A | -0.6317 | |
| 12 | R | A | -2.0269 | |
| 13 | V | A | -1.0457 | |
| 14 | T | A | -1.7901 | |
| 15 | E | A | -3.0262 | |
| 16 | D | A | -2.7091 | |
| 17 | S | A | -2.0831 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2274 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3768 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2934 | |
| 24 | A | A | -1.4152 | |
| 25 | P | A | -1.4127 | |
| 26 | D | A | -2.2747 | |
| 27 | A | A | -1.4353 | |
| 28 | A | A | -1.1655 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.4289 | |
| 31 | S | A | -1.7407 | |
| 32 | F | A | 0.0000 | |
| 33 | K | A | -1.0553 | |
| 34 | I | A | 0.0000 | |
| 35 | G | A | -0.9619 | |
| 36 | Y | A | -0.3237 | |
| 37 | W | A | -0.6680 | |
| 38 | E | A | -1.4176 | |
| 39 | W | A | -1.1291 | |
| 40 | R | A | -2.4506 | |
| 41 | K | A | -2.2942 | |
| 42 | Y | A | -0.3753 | |
| 43 | G | A | -1.0357 | |
| 44 | E | A | -1.8117 | |
| 45 | A | A | -0.7529 | |
| 46 | I | A | -0.5309 | |
| 47 | E | A | -1.8572 | |
| 48 | L | A | -1.1803 | |
| 49 | N | A | -1.7165 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.4351 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6218 | |
| 54 | E | A | -1.5514 | |
| 55 | R | A | -1.1594 | |
| 56 | S | A | -0.6505 | |
| 57 | Y | A | -0.7413 | |
| 58 | D | A | -1.7162 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3619 | |
| 61 | G | A | -1.4910 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9513 | |
| 64 | P | A | -2.4923 | |
| 65 | G | A | -1.7577 | |
| 66 | T | A | -2.0196 | |
| 67 | E | A | -1.6085 | |
| 68 | Y | A | 0.0000 | |
| 69 | R | A | -0.5361 | |
| 70 | V | A | 0.0000 | |
| 71 | L | A | -0.3718 | |
| 72 | I | A | 0.0000 | |
| 73 | Y | A | -0.5553 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.1778 | |
| 76 | K | A | -1.6876 | |
| 77 | G | A | -1.4089 | |
| 78 | G | A | -1.1460 | |
| 79 | A | A | -0.6547 | |
| 80 | G | A | -0.4642 | |
| 81 | S | A | 0.0000 | |
| 82 | H | A | -0.7664 | |
| 83 | P | A | -0.9128 | |
| 84 | L | A | -0.9514 | |
| 85 | R | A | -1.3424 | |
| 86 | A | A | -0.0015 | |
| 87 | L | A | 0.7546 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.8193 | |
| 90 | T | A | -1.8441 |