Project name: 7925002f5267d01

Status: done

Started: 2025-06-03 04:50:00
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Chain sequence(s) H: DVQLVESGGGLVQPGGSLRLSCAASGRTFSEYAMGWFRQAPGKEREFVATISWSGGATYYTDSVKGRFTISRDNAKNTVYLQMNSLRPEDTAVYYCAAAGLGTVVSEWDYDYDYWGQGTLVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:09)
Show buried residues

Minimal score value
-3.2137
Maximal score value
1.9283
Average score
-0.487
Total score value
-60.8812

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.5757
2 V H 0.0000
3 Q H -1.5417
4 L H 0.0000
5 V H 1.1023
6 E H 0.4880
7 S H -0.1083
8 G H -0.6034
9 G H 0.2155
11 G H 0.8378
12 L H 1.4641
13 V H 0.0137
14 Q H -1.3062
15 P H -1.5108
16 G H -1.3303
17 G H -0.8569
18 S H -0.9688
19 L H -0.4749
20 R H -1.2293
21 L H 0.0000
22 S H -0.1481
23 C H 0.0000
24 A H -0.2346
25 A H 0.0000
26 S H -1.4477
27 G H -1.9342
28 R H -2.0514
29 T H -1.0682
30 F H 0.0000
35 S H -1.0390
36 E H -0.6809
37 Y H 0.0000
38 A H 0.0000
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.4103
45 A H -1.4052
46 P H -1.2781
47 G H -1.8128
48 K H -2.9722
49 E H -3.2137
50 R H -2.3873
51 E H -1.5265
52 F H -0.5643
53 V H 0.0000
54 A H 0.0000
55 T H 0.0000
56 I H 0.0000
57 S H 0.0000
58 W H 0.3011
59 S H -0.2818
62 G H -0.5010
63 G H -0.5267
64 A H 0.2788
65 T H 0.4858
66 Y H 0.2322
67 Y H -0.5856
68 T H -1.2435
69 D H -2.3092
70 S H -1.6527
71 V H 0.0000
72 K H -2.0325
74 G H -1.5081
75 R H -1.3468
76 F H 0.0000
77 T H -0.5428
78 I H 0.0000
79 S H -0.3117
80 R H -0.8851
81 D H -1.4259
82 N H -1.6017
83 A H -1.3428
84 K H -2.3358
85 N H -2.0241
86 T H 0.0000
87 V H 0.0000
88 Y H -0.2300
89 L H 0.0000
90 Q H -0.7834
91 M H 0.0000
92 N H -1.1743
93 S H -1.1155
94 L H 0.0000
95 R H -2.1951
96 P H -1.8885
97 E H -2.3041
98 D H 0.0000
99 T H -0.4361
100 A H 0.0000
101 V H 0.7314
102 Y H 0.0000
103 Y H 0.2435
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 A H 0.0000
108 G H 0.1136
109 L H 1.2083
110 G H 0.4804
111 T H 0.8853
111A V H 1.9283
111B V H 1.2171
112C S H 0.0000
112B E H -0.2964
112A W H 0.6273
112 D H -0.3782
113 Y H 0.5288
114 D H -0.3111
115 Y H 0.0000
116 D H -1.7749
117 Y H -1.0009
118 W H -0.3094
119 G H -0.1038
120 Q H -0.7232
121 G H 0.1087
122 T H 0.5998
123 L H 1.5965
124 V H 0.0000
125 T H 0.3407
126 V H 0.0000
127 S H -0.8660
128 S H -0.8807
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Laboratory of Theory of Biopolymers 2018