Chain sequence(s) |
H: DVQLVESGGGLVQPGGSLRLSCAASGRTFSEYAMGWFRQAPGKEREFVATISWSGGATYYTDSVKGRFTISRDNAKNTVYLQMNSLRPEDTAVYYCAAAGLGTVVSEWDYDYDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:07) [INFO] Main: Simulation completed successfully. (00:02:09) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | H | -2.5757 | |
2 | V | H | 0.0000 | |
3 | Q | H | -1.5417 | |
4 | L | H | 0.0000 | |
5 | V | H | 1.1023 | |
6 | E | H | 0.4880 | |
7 | S | H | -0.1083 | |
8 | G | H | -0.6034 | |
9 | G | H | 0.2155 | |
11 | G | H | 0.8378 | |
12 | L | H | 1.4641 | |
13 | V | H | 0.0137 | |
14 | Q | H | -1.3062 | |
15 | P | H | -1.5108 | |
16 | G | H | -1.3303 | |
17 | G | H | -0.8569 | |
18 | S | H | -0.9688 | |
19 | L | H | -0.4749 | |
20 | R | H | -1.2293 | |
21 | L | H | 0.0000 | |
22 | S | H | -0.1481 | |
23 | C | H | 0.0000 | |
24 | A | H | -0.2346 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.4477 | |
27 | G | H | -1.9342 | |
28 | R | H | -2.0514 | |
29 | T | H | -1.0682 | |
30 | F | H | 0.0000 | |
35 | S | H | -1.0390 | |
36 | E | H | -0.6809 | |
37 | Y | H | 0.0000 | |
38 | A | H | 0.0000 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -1.4103 | |
45 | A | H | -1.4052 | |
46 | P | H | -1.2781 | |
47 | G | H | -1.8128 | |
48 | K | H | -2.9722 | |
49 | E | H | -3.2137 | |
50 | R | H | -2.3873 | |
51 | E | H | -1.5265 | |
52 | F | H | -0.5643 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | T | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | S | H | 0.0000 | |
58 | W | H | 0.3011 | |
59 | S | H | -0.2818 | |
62 | G | H | -0.5010 | |
63 | G | H | -0.5267 | |
64 | A | H | 0.2788 | |
65 | T | H | 0.4858 | |
66 | Y | H | 0.2322 | |
67 | Y | H | -0.5856 | |
68 | T | H | -1.2435 | |
69 | D | H | -2.3092 | |
70 | S | H | -1.6527 | |
71 | V | H | 0.0000 | |
72 | K | H | -2.0325 | |
74 | G | H | -1.5081 | |
75 | R | H | -1.3468 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.5428 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.3117 | |
80 | R | H | -0.8851 | |
81 | D | H | -1.4259 | |
82 | N | H | -1.6017 | |
83 | A | H | -1.3428 | |
84 | K | H | -2.3358 | |
85 | N | H | -2.0241 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.2300 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.7834 | |
91 | M | H | 0.0000 | |
92 | N | H | -1.1743 | |
93 | S | H | -1.1155 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.1951 | |
96 | P | H | -1.8885 | |
97 | E | H | -2.3041 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.4361 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.7314 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.2435 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0000 | |
107 | A | H | 0.0000 | |
108 | G | H | 0.1136 | |
109 | L | H | 1.2083 | |
110 | G | H | 0.4804 | |
111 | T | H | 0.8853 | |
111A | V | H | 1.9283 | |
111B | V | H | 1.2171 | |
112C | S | H | 0.0000 | |
112B | E | H | -0.2964 | |
112A | W | H | 0.6273 | |
112 | D | H | -0.3782 | |
113 | Y | H | 0.5288 | |
114 | D | H | -0.3111 | |
115 | Y | H | 0.0000 | |
116 | D | H | -1.7749 | |
117 | Y | H | -1.0009 | |
118 | W | H | -0.3094 | |
119 | G | H | -0.1038 | |
120 | Q | H | -0.7232 | |
121 | G | H | 0.1087 | |
122 | T | H | 0.5998 | |
123 | L | H | 1.5965 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.3407 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.8660 | |
128 | S | H | -0.8807 |