Project name: 792d19cdae8857d

Status: done

Started: 2026-04-11 13:39:18
Settings
Chain sequence(s) A: NCEKSLEFLLEYYNIYLK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-2.7074
Maximal score value
2.7235
Average score
0.3885
Total score value
6.993

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.9849
2 C A -1.4623
3 E A -2.4912
4 K A -2.7074
5 S A -1.2570
6 L A -0.3634
7 E A -1.0449
8 F A 1.4240
9 L A 1.5767
10 L A 1.3107
11 E A 0.7350
12 Y A 2.4682
13 Y A 2.7235
14 N A 0.9430
15 I A 2.6761
16 Y A 2.6864
17 L A 2.0925
18 K A -0.3320
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018