| Chain sequence(s) |
A: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -2.2495 | |
| 2 | Q | A | -2.6117 | |
| 3 | I | A | 0.0000 | |
| 4 | F | A | -1.0075 | |
| 5 | V | A | 0.0000 | |
| 6 | K | A | -1.4349 | |
| 7 | T | A | -0.3499 | |
| 8 | L | A | 0.9371 | |
| 9 | T | A | -0.1297 | |
| 10 | G | A | -0.9834 | |
| 11 | K | A | -1.6556 | |
| 12 | T | A | -1.1395 | |
| 13 | I | A | 0.0000 | |
| 14 | T | A | -0.9928 | |
| 15 | L | A | 0.0000 | |
| 16 | E | A | -2.7432 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -2.8221 | |
| 19 | P | A | -2.1398 | |
| 20 | S | A | -1.6006 | |
| 21 | D | A | -1.9796 | |
| 22 | T | A | -2.6415 | |
| 23 | I | A | 0.0000 | |
| 24 | E | A | -3.2594 | |
| 25 | N | A | -1.8925 | |
| 26 | V | A | 0.0000 | |
| 27 | K | A | 0.0000 | |
| 28 | A | A | -1.9335 | |
| 29 | K | A | -2.5451 | |
| 30 | I | A | 0.0000 | |
| 31 | Q | A | -2.8156 | |
| 32 | D | A | -3.4157 | |
| 33 | K | A | -3.3496 | |
| 34 | E | A | -2.4747 | |
| 35 | G | A | -2.0670 | |
| 36 | I | A | -1.2992 | |
| 37 | P | A | -1.0310 | |
| 38 | P | A | -1.9580 | |
| 39 | D | A | -2.2675 | |
| 40 | Q | A | -1.4105 | |
| 41 | Q | A | 0.0000 | |
| 42 | R | A | -1.6807 | |
| 43 | L | A | 0.0000 | |
| 44 | I | A | -1.1910 | |
| 45 | F | A | -0.6015 | |
| 46 | A | A | -0.6748 | |
| 47 | G | A | -1.1788 | |
| 48 | K | A | -1.9923 | |
| 49 | Q | A | -2.4696 | |
| 50 | L | A | 0.0000 | |
| 51 | E | A | -3.6874 | |
| 52 | D | A | -3.6076 | |
| 53 | G | A | -2.7868 | |
| 54 | R | A | -3.4684 | |
| 55 | T | A | -2.8595 | |
| 56 | L | A | 0.0000 | |
| 57 | S | A | -2.3622 | |
| 58 | D | A | -2.6783 | |
| 59 | Y | A | -2.0717 | |
| 60 | N | A | -2.2804 | |
| 61 | I | A | 0.0000 | |
| 62 | Q | A | -3.1073 | |
| 63 | K | A | -3.8064 | |
| 64 | E | A | -3.1940 | |
| 65 | S | A | -1.8518 | |
| 66 | T | A | -1.0547 | |
| 67 | L | A | 0.0000 | |
| 68 | H | A | -0.6578 | |
| 69 | L | A | 0.0000 | |
| 70 | V | A | 0.4013 | |
| 71 | L | A | 0.1828 | |
| 72 | R | A | -1.2501 | |
| 73 | L | A | -0.3527 | |
| 74 | R | A | -1.9435 | |
| 75 | G | A | -1.3463 | |
| 76 | G | A | -0.8121 |