| Chain sequence(s) |
A: AADNPYQRGPDPTNASIEAATGPFAVGTQPIVGASGFGGGQIYYPTDTSQTYGAVVIVPGFISVWAQLNWLGPRLASQGFVVIGIETSVITDLPDPRGDQALAALDWATTRSPVASRIDRTRLAAAGWSMGGGGLRRAALQRPSLKAIVGMAPWNGERNWSAVTVPTLFFGGSSDAVASPNDHAKPFYNSITRAEKDYIELRNADHFFPTSANTTMAKYFISWLKRWVDNDTRYTQFLCPGPSTGLFAPVSASMNTCPF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:12)
[INFO] Main: Simulation completed successfully. (00:02:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4175 | |
| 2 | A | A | -0.8866 | |
| 3 | D | A | -1.9340 | |
| 4 | N | A | -1.4367 | |
| 5 | P | A | -0.9374 | |
| 6 | Y | A | -0.5118 | |
| 7 | Q | A | -1.0901 | |
| 8 | R | A | 0.0000 | |
| 9 | G | A | -0.8449 | |
| 10 | P | A | -1.3670 | |
| 11 | D | A | -2.0858 | |
| 12 | P | A | 0.0000 | |
| 13 | T | A | -1.4163 | |
| 14 | N | A | -1.6979 | |
| 15 | A | A | -0.9389 | |
| 16 | S | A | -1.0986 | |
| 17 | I | A | 0.0000 | |
| 18 | E | A | -1.3547 | |
| 19 | A | A | -0.6877 | |
| 20 | A | A | -0.2507 | |
| 21 | T | A | -0.1863 | |
| 22 | G | A | -0.2892 | |
| 23 | P | A | -0.2362 | |
| 24 | F | A | 0.0331 | |
| 25 | A | A | 0.1764 | |
| 26 | V | A | 0.4228 | |
| 27 | G | A | 0.0823 | |
| 28 | T | A | -0.1945 | |
| 29 | Q | A | -0.2721 | |
| 30 | P | A | -0.1230 | |
| 31 | I | A | 0.0000 | |
| 32 | V | A | 1.0833 | |
| 33 | G | A | 0.0059 | |
| 34 | A | A | -0.2923 | |
| 35 | S | A | -0.5399 | |
| 36 | G | A | -0.8988 | |
| 37 | F | A | 0.0000 | |
| 38 | G | A | -0.1951 | |
| 39 | G | A | 0.0000 | |
| 40 | G | A | -0.3489 | |
| 41 | Q | A | -0.5718 | |
| 42 | I | A | 0.0000 | |
| 43 | Y | A | 0.0000 | |
| 44 | Y | A | 0.0909 | |
| 45 | P | A | 0.0000 | |
| 46 | T | A | -0.2467 | |
| 47 | D | A | -0.8237 | |
| 48 | T | A | -0.7550 | |
| 49 | S | A | -0.6779 | |
| 50 | Q | A | -0.7214 | |
| 51 | T | A | -0.7225 | |
| 52 | Y | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | V | A | 0.0000 | |
| 57 | I | A | 0.0000 | |
| 58 | V | A | 0.0000 | |
| 59 | P | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | F | A | 2.4175 | |
| 62 | I | A | 3.0036 | |
| 63 | S | A | 0.0000 | |
| 64 | V | A | 0.9723 | |
| 65 | W | A | 0.0000 | |
| 66 | A | A | -0.3843 | |
| 67 | Q | A | -0.3362 | |
| 68 | L | A | 0.0000 | |
| 69 | N | A | -1.0041 | |
| 70 | W | A | -0.4430 | |
| 71 | L | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | P | A | -0.0999 | |
| 74 | R | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | Q | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | G | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | E | A | -0.1539 | |
| 87 | T | A | 0.0000 | |
| 88 | S | A | 0.2725 | |
| 89 | V | A | 2.1102 | |
| 90 | I | A | 2.5380 | |
| 91 | T | A | 1.8166 | |
| 92 | D | A | 1.2361 | |
| 93 | L | A | 1.0587 | |
| 94 | P | A | 0.0000 | |
| 95 | D | A | -1.2940 | |
| 96 | P | A | -0.6134 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | D | A | -1.3135 | |
| 100 | Q | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | L | A | 0.0000 | |
| 103 | A | A | -0.6789 | |
| 104 | A | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | D | A | -1.6361 | |
| 107 | W | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | T | A | 0.0000 | |
| 110 | T | A | -1.5322 | |
| 111 | R | A | -1.9863 | |
| 112 | S | A | 0.0000 | |
| 113 | P | A | -0.6053 | |
| 114 | V | A | 0.0000 | |
| 115 | A | A | -1.1566 | |
| 116 | S | A | -0.9301 | |
| 117 | R | A | -0.9338 | |
| 118 | I | A | 0.0000 | |
| 119 | D | A | -1.2440 | |
| 120 | R | A | -2.1935 | |
| 121 | T | A | -1.1475 | |
| 122 | R | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | A | A | 0.0000 | |
| 125 | A | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | G | A | 0.0000 | |
| 128 | W | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | M | A | 0.6534 | |
| 131 | G | A | 0.0000 | |
| 132 | G | A | 0.0000 | |
| 133 | G | A | 0.0000 | |
| 134 | G | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | R | A | -1.2556 | |
| 137 | R | A | -1.3956 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | L | A | -0.3307 | |
| 141 | Q | A | -1.1831 | |
| 142 | R | A | -1.0391 | |
| 143 | P | A | -0.6647 | |
| 144 | S | A | -0.6577 | |
| 145 | L | A | 0.0000 | |
| 146 | K | A | -0.8402 | |
| 147 | A | A | 0.0000 | |
| 148 | I | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | M | A | 0.0000 | |
| 152 | A | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | W | A | 0.1920 | |
| 155 | N | A | 0.0000 | |
| 156 | G | A | -1.4717 | |
| 157 | E | A | -2.3570 | |
| 158 | R | A | -3.2025 | |
| 159 | N | A | -2.5659 | |
| 160 | W | A | 0.0000 | |
| 161 | S | A | -1.2393 | |
| 162 | A | A | -0.5070 | |
| 163 | V | A | 0.0000 | |
| 164 | T | A | -0.8936 | |
| 165 | V | A | 0.0000 | |
| 166 | P | A | -0.6790 | |
| 167 | T | A | 0.0000 | |
| 168 | L | A | 0.0000 | |
| 169 | F | A | 0.0000 | |
| 170 | F | A | 0.0000 | |
| 171 | G | A | 0.0000 | |
| 172 | G | A | 0.0000 | |
| 173 | S | A | -1.2622 | |
| 174 | S | A | -1.0614 | |
| 175 | D | A | 0.0000 | |
| 176 | A | A | 0.5477 | |
| 177 | V | A | 1.6816 | |
| 178 | A | A | 0.0000 | |
| 179 | S | A | -0.6074 | |
| 180 | P | A | 0.0000 | |
| 181 | N | A | -2.0550 | |
| 182 | D | A | -2.0958 | |
| 183 | H | A | -1.4933 | |
| 184 | A | A | 0.0000 | |
| 185 | K | A | -1.5917 | |
| 186 | P | A | -2.1000 | |
| 187 | F | A | 0.0000 | |
| 188 | Y | A | 0.0000 | |
| 189 | N | A | -1.7611 | |
| 190 | S | A | -1.6334 | |
| 191 | I | A | 0.0000 | |
| 192 | T | A | -1.3303 | |
| 193 | R | A | -2.0337 | |
| 194 | A | A | -1.2552 | |
| 195 | E | A | -1.0085 | |
| 196 | K | A | -0.8435 | |
| 197 | D | A | 0.0000 | |
| 198 | Y | A | 0.0000 | |
| 199 | I | A | 0.0000 | |
| 200 | E | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | R | A | -1.0902 | |
| 203 | N | A | -1.9975 | |
| 204 | A | A | -1.1935 | |
| 205 | D | A | -0.8699 | |
| 206 | H | A | 0.0000 | |
| 207 | F | A | 1.5667 | |
| 208 | F | A | 0.0000 | |
| 209 | P | A | 0.0000 | |
| 210 | T | A | 0.1567 | |
| 211 | S | A | -0.1235 | |
| 212 | A | A | -0.2327 | |
| 213 | N | A | -0.4078 | |
| 214 | T | A | -0.4852 | |
| 215 | T | A | -0.3872 | |
| 216 | M | A | 0.0000 | |
| 217 | A | A | 0.0000 | |
| 218 | K | A | -0.7673 | |
| 219 | Y | A | 0.0000 | |
| 220 | F | A | 0.0000 | |
| 221 | I | A | 0.0000 | |
| 222 | S | A | 0.0000 | |
| 223 | W | A | 0.0000 | |
| 224 | L | A | 0.0000 | |
| 225 | K | A | 0.0000 | |
| 226 | R | A | 0.0000 | |
| 227 | W | A | -0.5621 | |
| 228 | V | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | N | A | -1.3888 | |
| 231 | D | A | 0.0000 | |
| 232 | T | A | -0.7548 | |
| 233 | R | A | -1.2380 | |
| 234 | Y | A | 0.0000 | |
| 235 | T | A | -0.7722 | |
| 236 | Q | A | -1.4629 | |
| 237 | F | A | 0.0000 | |
| 238 | L | A | 0.0000 | |
| 239 | C | A | -0.4706 | |
| 240 | P | A | -0.5674 | |
| 241 | G | A | -0.4626 | |
| 242 | P | A | -0.2928 | |
| 243 | S | A | -0.0403 | |
| 244 | T | A | 0.2228 | |
| 245 | G | A | 0.8844 | |
| 246 | L | A | 2.1815 | |
| 247 | F | A | 2.4142 | |
| 248 | A | A | 0.9864 | |
| 249 | P | A | -0.0483 | |
| 250 | V | A | 0.0000 | |
| 251 | S | A | -0.1234 | |
| 252 | A | A | -0.2147 | |
| 253 | S | A | -0.1118 | |
| 254 | M | A | -0.1709 | |
| 255 | N | A | -0.4042 | |
| 256 | T | A | -0.2753 | |
| 257 | C | A | -0.0606 | |
| 258 | P | A | -0.0864 | |
| 259 | F | A | 0.1999 |