Project name: 795c31a4b574a8c

Status: done

Started: 2025-07-13 10:39:02
Settings
Chain sequence(s) A: LLLLLLKDPTPPTTPTPPTTPTPTPEFQYIVVLKEGTQSALSAQSAGGLIGSLGLDPQGITVLSVYGQAIEGFAAKLSAQNLEKVRANANVAYVEQDGMMYASALAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSWFDQGTRDVIGLRIAGGAILWATPDHKVLTEYGWRAAGELRKGDRVAQPRRFDGFGDSAPIPARVQALADALDDKFLHDMLAEELRYSVIREVLPTRRARTFGLEVEELHTLVAEGVVVHNAAAAHHHHHHVGTMITSALHRAADWAKSVFSSAALGDPRRTARLVNVAAQLAKYSGKSITISSEGSKAMQEGAYRFIRNPNVSAEAIRKAGAMQTVKLAQEFPELLAIEDTTSLSYRHQVAEKLGKLGSIQDKSRGWWVHSVLLLEATTFRTVGLLHQEWWMRPDDPADADEKESGKWLAAAATSRLRMGSMMSNVIAVCDREADIHAYLQDKLAHNERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYQISIAQKGVVDKRGKRKNRPARKASLSLRSGRITLKQGNITLNAVLAEEINPPKGETPLKWLLLTSEPVESLAQALRVIDIYTHRWRIEEFHKAWKTGAGAERQRMEEPDNLERMVSILSFVAVRLLQLRESFTPPQALRAQGLLKEAEHVESQSAETVLTPDECQLLGYLDKGKRKRKEKAGSLQWAYMAIARLGGFMDSKRTGIASWGALWEGWEALQSKLDGFLAAKDLMAQGIKI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations Yes
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:17:49)
[INFO]       Auto_mut: Residue number 3 from chain A and a score of 4.174 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Residue number 2 from chain A and a score of 4.169 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Residue number 4 from chain A and a score of 4.106 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Residue number 1 from chain A and a score of 3.525 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Residue number 5 from chain A and a score of 3.519 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Residue number 6 from chain A and a score of 2.142 (leucine) selected for   
                       automated muatation                                                         (00:17:56)
[INFO]       Auto_mut: Mutating residue number 3 from chain A (leucine) into glutamic acid         (00:17:56)
[INFO]       Auto_mut: Mutating residue number 3 from chain A (leucine) into aspartic acid         (00:17:56)
[INFO]       Auto_mut: Mutating residue number 2 from chain A (leucine) into glutamic acid         (00:17:56)
[INFO]       Auto_mut: Mutating residue number 3 from chain A (leucine) into lysine                (00:25:42)
[INFO]       Auto_mut: Mutating residue number 3 from chain A (leucine) into arginine              (00:25:45)
[INFO]       Auto_mut: Mutating residue number 2 from chain A (leucine) into lysine                (00:25:55)
[INFO]       Auto_mut: Mutating residue number 2 from chain A (leucine) into aspartic acid         (00:33:36)
[INFO]       Auto_mut: Mutating residue number 4 from chain A (leucine) into glutamic acid         (00:33:38)
[INFO]       Auto_mut: Mutating residue number 4 from chain A (leucine) into aspartic acid         (00:34:01)
[INFO]       Auto_mut: Mutating residue number 2 from chain A (leucine) into arginine              (00:40:51)
[INFO]       Auto_mut: Mutating residue number 4 from chain A (leucine) into lysine                (00:41:03)
[INFO]       Auto_mut: Mutating residue number 4 from chain A (leucine) into arginine              (00:41:24)
[INFO]       Auto_mut: Mutating residue number 1 from chain A (leucine) into glutamic acid         (00:48:31)
[INFO]       Auto_mut: Mutating residue number 1 from chain A (leucine) into aspartic acid         (00:48:35)
[INFO]       Auto_mut: Mutating residue number 5 from chain A (leucine) into glutamic acid         (00:48:53)
[INFO]       Auto_mut: Mutating residue number 1 from chain A (leucine) into arginine              (00:55:58)
[INFO]       Auto_mut: Mutating residue number 1 from chain A (leucine) into lysine                (00:55:58)
[INFO]       Auto_mut: Mutating residue number 5 from chain A (leucine) into lysine                (00:56:08)
[INFO]       Auto_mut: Mutating residue number 5 from chain A (leucine) into aspartic acid         (01:03:33)
[INFO]       Auto_mut: Mutating residue number 6 from chain A (leucine) into glutamic acid         (01:03:35)
[INFO]       Auto_mut: Mutating residue number 6 from chain A (leucine) into aspartic acid         (01:03:36)
[INFO]       Auto_mut: Mutating residue number 6 from chain A (leucine) into lysine                (01:10:54)
[INFO]       Auto_mut: Mutating residue number 6 from chain A (leucine) into arginine              (01:10:58)
[INFO]       Auto_mut: Mutating residue number 5 from chain A (leucine) into arginine              (01:11:00)
[INFO]       Auto_mut: Effect of mutation residue number 3 from chain A (leucine) into glutamic    
                       acid: Energy difference: 0.0387 kcal/mol, Difference in average score from  
                       the base case: 0.0020                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 3 from chain A (leucine) into lysine:     
                       Energy difference: 0.1073 kcal/mol, Difference in average score from the    
                       base case: 0.0037                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 3 from chain A (leucine) into aspartic    
                       acid: Energy difference: -0.0809 kcal/mol, Difference in average score from 
                       the base case: 0.0021                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 3 from chain A (leucine) into arginine:   
                       Energy difference: -0.3899 kcal/mol, Difference in average score from the   
                       base case: -0.0001                                                          (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 2 from chain A (leucine) into glutamic    
                       acid: Energy difference: 0.0398 kcal/mol, Difference in average score from  
                       the base case: 0.0033                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 2 from chain A (leucine) into lysine:     
                       Energy difference: 0.0635 kcal/mol, Difference in average score from the    
                       base case: 0.0049                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 2 from chain A (leucine) into aspartic    
                       acid: Energy difference: -0.0408 kcal/mol, Difference in average score from 
                       the base case: 0.0034                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 2 from chain A (leucine) into arginine:   
                       Energy difference: 0.1287 kcal/mol, Difference in average score from the    
                       base case: 0.0097                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 4 from chain A (leucine) into glutamic    
                       acid: Energy difference: -0.1749 kcal/mol, Difference in average score from 
                       the base case: 0.0002                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 4 from chain A (leucine) into lysine:     
                       Energy difference: -0.1097 kcal/mol, Difference in average score from the   
                       base case: 0.0033                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 4 from chain A (leucine) into aspartic    
                       acid: Energy difference: -0.3059 kcal/mol, Difference in average score from 
                       the base case: 0.0017                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 4 from chain A (leucine) into arginine:   
                       Energy difference: -0.6681 kcal/mol, Difference in average score from the   
                       base case: 0.0016                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 1 from chain A (leucine) into glutamic    
                       acid: Energy difference: -0.4847 kcal/mol, Difference in average score from 
                       the base case: 0.0051                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 1 from chain A (leucine) into lysine:     
                       Energy difference: -0.1331 kcal/mol, Difference in average score from the   
                       base case: 0.0067                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 1 from chain A (leucine) into aspartic    
                       acid: Energy difference: -0.8359 kcal/mol, Difference in average score from 
                       the base case: 0.0052                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 1 from chain A (leucine) into arginine:   
                       Energy difference: -0.0829 kcal/mol, Difference in average score from the   
                       base case: 0.0116                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 5 from chain A (leucine) into glutamic    
                       acid: Energy difference: 0.6287 kcal/mol, Difference in average score from  
                       the base case: 0.0002                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 5 from chain A (leucine) into lysine:     
                       Energy difference: 0.1258 kcal/mol, Difference in average score from the    
                       base case: 0.0033                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 5 from chain A (leucine) into aspartic    
                       acid: Energy difference: 0.4913 kcal/mol, Difference in average score from  
                       the base case: 0.0017                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 5 from chain A (leucine) into arginine:   
                       Energy difference: 0.0355 kcal/mol, Difference in average score from the    
                       base case: 0.0015                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 6 from chain A (leucine) into glutamic    
                       acid: Energy difference: 0.4904 kcal/mol, Difference in average score from  
                       the base case: 0.0009                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 6 from chain A (leucine) into lysine:     
                       Energy difference: 0.1659 kcal/mol, Difference in average score from the    
                       base case: 0.0040                                                           (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 6 from chain A (leucine) into aspartic    
                       acid: Energy difference: 0.5789 kcal/mol, Difference in average score from  
                       the base case: 0.0024                                                       (01:18:34)
[INFO]       Auto_mut: Effect of mutation residue number 6 from chain A (leucine) into arginine:   
                       Energy difference: -0.4782 kcal/mol, Difference in average score from the   
                       base case: 0.0022                                                           (01:18:34)
[INFO]       Main:     Simulation completed successfully.                                          (01:18:44)
Show buried residues

Minimal score value
-4.5617
Maximal score value
4.1742
Average score
-0.8894
Total score value
-675.9364

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 3.5245
2 L A 4.1694
3 L A 4.1742
4 L A 4.1060
5 L A 3.5194
6 L A 2.1422
7 K A -0.9101
8 D A -2.2082
9 P A -1.6400
10 T A -0.7983
11 P A -0.6714
12 P A -0.5036
13 T A -0.3638
14 T A -0.3682
15 P A -0.4664
16 T A -0.4023
17 P A -0.5030
18 P A -0.4972
19 T A -0.3634
20 T A -0.3361
21 P A -0.5539
22 T A -0.7447
23 P A -0.7866
24 T A -1.2655
25 P A -1.4181
26 E A -1.8679
27 F A -0.7597
28 Q A -1.3413
29 Y A 0.0000
30 I A -0.4443
31 V A 0.0000
32 V A 0.0000
33 L A -1.1735
34 K A -2.5465
35 E A -3.0268
36 G A -2.2623
37 T A -1.8826
38 Q A -1.9807
39 S A -0.8389
40 A A -0.4538
41 L A -0.5115
42 S A -0.6463
43 A A -0.4246
44 Q A -1.1581
45 S A -0.7797
46 A A -0.2157
47 G A -0.9370
48 G A -0.9128
49 L A 0.0000
50 I A -0.8456
51 G A -1.0388
52 S A -0.6661
53 L A 0.0000
54 G A -1.0788
55 L A 0.0000
56 D A -1.9062
57 P A -1.4537
58 Q A -1.6557
59 G A -1.3738
60 I A 0.0000
61 T A -0.1775
62 V A 0.7145
63 L A 1.1331
64 S A 1.3276
65 V A 1.8008
66 Y A 0.7994
67 G A -0.4460
68 Q A -1.1884
69 A A -0.3566
70 I A -0.1844
71 E A -1.2942
72 G A 0.0000
73 F A 0.0000
74 A A 0.0000
75 A A 0.0000
76 K A -0.9479
77 L A 0.0000
78 S A -1.2465
79 A A -1.0130
80 Q A -2.0652
81 N A 0.0000
82 L A -1.7749
83 E A -3.1269
84 K A -2.6658
85 V A 0.0000
86 R A -2.4295
87 A A -1.5978
88 N A -1.2058
89 A A -0.8084
90 N A -1.5151
91 V A -0.9309
92 A A -0.6216
93 Y A 0.1735
94 V A -0.5767
95 E A -2.0143
96 Q A -2.6050
97 D A -1.7600
98 G A -0.6687
99 M A 1.4634
100 M A 2.0219
101 Y A 1.7410
102 A A 0.5930
103 S A -0.4051
104 A A 0.0000
105 L A 0.0000
106 A A 0.0000
107 E A -2.6870
108 G A -2.2554
109 T A 0.0000
110 R A -2.9913
111 I A 0.0000
112 F A -0.5300
113 D A 0.0000
114 P A 0.0000
115 V A 1.1249
116 T A 0.3059
117 G A -0.3687
118 T A -0.0598
119 T A -1.0466
120 H A -2.0190
121 R A -3.2711
122 I A 0.0000
123 E A -3.0550
124 D A -3.1566
125 V A 0.0000
126 V A 0.0000
127 D A -3.2536
128 G A -2.7948
129 R A -2.9481
130 K A -2.2104
131 P A -0.9543
132 I A 0.0000
133 H A -0.1962
134 V A 0.0000
135 V A 0.0000
136 A A 0.0000
137 A A 0.0000
138 A A -1.6328
139 K A -2.5697
140 D A -2.9487
141 G A -2.1357
142 T A -1.5326
143 L A 0.0000
144 H A -0.7936
145 A A -0.4426
146 R A -0.8097
147 P A -0.4161
148 V A 0.0000
149 V A 0.4349
150 S A 0.2012
151 W A -0.6606
152 F A -0.6737
153 D A -2.1208
154 Q A -0.8111
155 G A -0.9733
156 T A -1.8143
157 R A -1.6075
158 D A -2.2760
159 V A 0.0000
160 I A -0.7229
161 G A 0.0000
162 L A 0.0000
163 R A -2.0553
164 I A 0.0000
165 A A -1.1868
166 G A -1.2126
167 G A -1.0994
168 A A -0.4793
169 I A -0.3989
170 L A 0.0000
171 W A -0.2533
172 A A 0.0000
173 T A 0.0000
174 P A -1.5727
175 D A -2.2905
176 H A 0.0000
177 K A -1.6790
178 V A 0.0000
179 L A -0.3900
180 T A 0.0000
181 E A -1.4966
182 Y A 0.1268
183 G A -0.0876
184 W A -0.3075
185 R A -1.6283
186 A A -1.9624
187 A A 0.0000
188 G A -1.9617
189 E A -2.9526
190 L A 0.0000
191 R A -3.7530
192 K A -3.8840
193 G A -2.4561
194 D A -2.6506
195 R A -1.9893
196 V A 0.0000
197 A A 0.0000
198 Q A 0.0000
199 P A 0.0000
200 R A -2.4158
201 R A -3.3579
202 F A -1.9918
203 D A -2.1373
204 G A -1.6957
205 F A -1.6438
206 G A -2.3589
207 D A -2.6619
208 S A -1.5020
209 A A -0.6725
210 P A -0.5453
211 I A -0.0012
212 P A -0.7215
213 A A -0.9994
214 R A -2.0268
215 V A -1.0531
216 Q A -1.5683
217 A A -1.3040
218 L A -0.7192
219 A A 0.0000
220 D A -2.4799
221 A A -0.7550
222 L A -0.1854
223 D A -2.0709
224 D A -1.6930
225 K A -2.0049
226 F A 0.1076
227 L A -0.5588
228 H A -2.0210
229 D A -1.9687
230 M A -0.9688
231 L A -0.8443
232 A A -1.3455
233 E A -3.0205
234 E A -2.3780
235 L A 0.0000
236 R A -1.3603
237 Y A -0.3911
238 S A -0.6117
239 V A -1.4481
240 I A 0.0000
241 R A -3.6745
242 E A -3.1629
243 V A -1.5209
244 L A -0.6675
245 P A -0.5428
246 T A -1.2486
247 R A -2.4168
248 R A -3.1657
249 A A 0.0000
250 R A -2.3643
251 T A 0.0000
252 F A 0.0000
253 G A 0.0000
254 L A 0.0000
255 E A 0.0000
256 V A 0.0000
257 E A -1.3276
258 E A -1.7821
259 L A -1.1652
260 H A -0.9275
261 T A 0.0000
262 L A 0.0000
263 V A 0.0000
264 A A 0.0000
265 E A -0.7652
266 G A -0.7097
267 V A 0.0000
268 V A 0.0000
269 V A 0.0000
270 H A -0.6961
271 N A 0.0000
272 A A 0.0000
273 A A -0.2164
274 A A 0.1177
275 A A -0.7572
276 H A -1.6804
277 H A -2.0662
278 H A -2.2941
279 H A -2.2022
280 H A -1.7956
281 H A -1.5253
282 V A -0.4853
283 G A -0.4789
284 T A -0.0076
285 M A 0.9351
286 I A 0.7261
287 T A 0.1935
288 S A -0.1940
289 A A -0.7635
290 L A 0.0000
291 H A 0.0000
292 R A -1.4770
293 A A 0.0000
294 A A -1.8801
295 D A -2.5467
296 W A 0.0000
297 A A 0.0000
298 K A -2.4347
299 S A -1.4070
300 V A 0.0000
301 F A 0.0000
302 S A -0.9699
303 S A -0.7055
304 A A 0.0000
305 A A -0.6912
306 L A 0.0000
307 G A -1.1927
308 D A -1.5330
309 P A -1.7005
310 R A -2.5433
311 R A -2.1669
312 T A -1.7282
313 A A -1.9051
314 R A -2.1632
315 L A 0.0000
316 V A 0.0000
317 N A -1.8224
318 V A 0.0000
319 A A 0.0000
320 A A -1.4595
321 Q A -0.7589
322 L A 0.0000
323 A A 0.0000
324 K A -1.1475
325 Y A -0.5198
326 S A 0.0000
327 G A -0.7666
328 K A -0.6440
329 S A -0.3003
330 I A 0.0000
331 T A -0.1595
332 I A 0.8664
333 S A 0.0000
334 S A 0.0000
335 E A -1.5356
336 G A -1.3383
337 S A -1.5424
338 K A -2.4209
339 A A -1.2346
340 M A -1.4517
341 Q A -1.6414
342 E A -2.3326
343 G A -1.9924
344 A A 0.0000
345 Y A -1.6812
346 R A -2.9333
347 F A 0.0000
348 I A 0.0000
349 R A -3.2200
350 N A -2.4425
351 P A -1.9734
352 N A -1.9162
353 V A 0.0000
354 S A -1.5669
355 A A 0.0000
356 E A -2.2772
357 A A -1.4376
358 I A 0.0000
359 R A 0.0000
360 K A -1.8279
361 A A 0.0000
362 G A 0.0000
363 A A 0.0000
364 M A -0.5149
365 Q A -0.6511
366 T A 0.0000
367 V A -0.7348
368 K A -1.5067
369 L A -0.7397
370 A A 0.0000
371 Q A -1.7744
372 E A -1.6730
373 F A -0.9886
374 P A -0.8058
375 E A -0.8684
376 L A 0.0000
377 L A 0.0000
378 A A 0.0000
379 I A 0.0000
380 E A 0.0000
381 D A -0.5857
382 T A -0.4447
383 T A 0.0000
384 S A -0.0354
385 L A 0.0000
386 S A -1.0818
387 Y A 0.0000
388 R A -3.8313
389 H A -3.6331
390 Q A -3.4886
391 V A 0.0000
392 A A 0.0000
393 E A -3.7580
394 K A -3.0497
395 L A 0.0000
396 G A 0.0000
397 K A -1.7409
398 L A -0.6541
399 G A -0.8960
400 S A -0.6381
401 I A 0.0453
402 Q A -1.4117
403 D A -2.4612
404 K A -3.2496
405 S A -2.7428
406 R A -2.2467
407 G A 0.0000
408 W A 0.0000
409 W A 0.1155
410 V A 0.0000
411 H A 0.0000
412 S A 0.0000
413 V A 0.0000
414 L A 0.0000
415 L A 0.0000
416 L A 0.0000
417 E A 0.0000
418 A A 0.0000
419 T A -0.2437
420 T A -0.2600
421 F A 0.0000
422 R A -0.6255
423 T A 0.0000
424 V A 0.0000
425 G A 0.0000
426 L A 0.0000
427 L A 0.0000
428 H A 0.0000
429 Q A 0.0000
430 E A -0.4864
431 W A 0.1237
432 W A 0.1679
433 M A -0.0732
434 R A -1.6637
435 P A -2.4389
436 D A -2.8272
437 D A -3.2177
438 P A -2.6573
439 A A -2.2400
440 D A -3.5079
441 A A -3.4405
442 D A -3.6593
443 E A -4.0259
444 K A -3.4816
445 E A -2.4952
446 S A -1.5723
447 G A -1.2873
448 K A -0.9964
449 W A 0.0000
450 L A 0.1948
451 A A -0.0421
452 A A 0.0000
453 A A 0.0000
454 A A 0.2848
455 T A 0.3323
456 S A 0.0000
457 R A 0.0775
458 L A 1.0888
459 R A 0.1794
460 M A 0.0000
461 G A -0.1764
462 S A -0.3741
463 M A -0.5094
464 M A 0.0000
465 S A -1.0302
466 N A -0.8559
467 V A 0.0000
468 I A 0.0000
469 A A 0.0000
470 V A 0.0000
471 C A 0.0000
472 D A -2.0319
473 R A -3.5739
474 E A -3.2239
475 A A 0.0000
476 D A 0.0000
477 I A -0.7484
478 H A -0.6116
479 A A -0.3748
480 Y A 0.0000
481 L A 0.0000
482 Q A -1.0913
483 D A -0.7439
484 K A 0.0000
485 L A -0.6510
486 A A -0.7337
487 H A -1.4319
488 N A -1.8236
489 E A 0.0000
490 R A -0.8925
491 F A 0.0000
492 V A 0.0000
493 V A 0.0000
494 R A -1.8881
495 S A 0.0000
496 K A -3.0293
497 H A -1.8146
498 P A -0.6138
499 R A 0.0000
500 K A -0.9852
501 D A 0.0000
502 V A -1.2792
503 E A -2.0801
504 S A -0.8447
505 G A -0.6267
506 L A 0.1835
507 Y A 0.5923
508 L A 0.0000
509 Y A -0.2490
510 D A -1.3404
511 H A -1.3184
512 L A 0.0000
513 K A -2.0661
514 N A -2.3198
515 Q A -1.9290
516 P A -1.6970
517 E A -2.2492
518 L A -0.8780
519 G A -0.5245
520 G A -0.6681
521 Y A -0.2793
522 Q A -1.3469
523 I A -0.9679
524 S A -1.1042
525 I A -0.9013
526 A A -1.3172
527 Q A -2.7935
528 K A -3.2388
529 G A -2.8290
530 V A -2.0560
531 V A -1.4328
532 D A -2.3810
533 K A -2.8669
534 R A -3.3018
535 G A -2.5621
536 K A -3.5315
537 R A -3.5984
538 K A -3.4655
539 N A -3.8234
540 R A -3.3853
541 P A -2.2409
542 A A -1.7209
543 R A -1.4021
544 K A -1.9991
545 A A 0.0000
546 S A -0.9239
547 L A 0.0000
548 S A -0.6705
549 L A 0.0000
550 R A -1.5481
551 S A -1.5154
552 G A -1.7546
553 R A -2.3657
554 I A 0.0000
555 T A -1.7936
556 L A 0.0000
557 K A -3.1465
558 Q A -2.8101
559 G A -2.2542
560 N A -2.4779
561 I A 0.0000
562 T A -0.9422
563 L A 0.0000
564 N A 0.0000
565 A A 0.0000
566 V A 0.0000
567 L A 0.0000
568 A A 0.0000
569 E A -0.6470
570 E A 0.0000
571 I A 0.0257
572 N A -1.1629
573 P A -1.2905
574 P A -1.4999
575 K A -2.3268
576 G A -1.5308
577 E A -1.3621
578 T A -0.7628
579 P A -0.7833
580 L A -0.3190
581 K A -0.8498
582 W A 0.0000
583 L A -0.6326
584 L A 0.0000
585 L A 0.0000
586 T A 0.0000
587 S A -0.5589
588 E A 0.0000
589 P A -1.0852
590 V A 0.0000
591 E A -2.1289
592 S A -0.8342
593 L A -0.1949
594 A A -0.1633
595 Q A -0.8101
596 A A 0.0000
597 L A -0.0238
598 R A -0.6800
599 V A 0.0000
600 I A 0.0000
601 D A -0.7757
602 I A 0.0000
603 Y A 0.0000
604 T A -0.1973
605 H A -0.1968
606 R A 0.0000
607 W A 0.2671
608 R A -0.5836
609 I A 0.0000
610 E A -1.0673
611 E A -1.5134
612 F A 0.0000
613 H A 0.0000
614 K A -2.2214
615 A A 0.0000
616 W A 0.0000
617 K A -1.3229
618 T A -1.0154
619 G A 0.0000
620 A A 0.0000
621 G A 0.0000
622 A A 0.0000
623 E A -1.4474
624 R A -2.0365
625 Q A 0.0000
626 R A -2.9582
627 M A 0.0000
628 E A -3.1506
629 E A -3.2032
630 P A -2.3407
631 D A -2.7898
632 N A 0.0000
633 L A 0.0000
634 E A -1.3157
635 R A 0.0000
636 M A 0.0000
637 V A 0.0000
638 S A 0.0000
639 I A 0.0000
640 L A 0.0000
641 S A 0.0000
642 F A 0.0000
643 V A 0.0000
644 A A 0.0000
645 V A 0.0000
646 R A 0.0000
647 L A 0.0000
648 L A 0.0000
649 Q A 0.0000
650 L A 0.0000
651 R A -0.4791
652 E A -0.5501
653 S A 0.0000
654 F A 0.0000
655 T A 0.0000
656 P A -0.5799
657 P A 0.0000
658 Q A -0.7149
659 A A -0.5513
660 L A -1.1723
661 R A -1.8886
662 A A -1.0197
663 Q A -1.3635
664 G A -1.1174
665 L A -0.7436
666 L A -0.7260
667 K A -2.5286
668 E A -2.6270
669 A A 0.0000
670 E A -3.2657
671 H A -2.8410
672 V A -1.7656
673 E A -2.3425
674 S A -2.0905
675 Q A -2.0802
676 S A -1.5074
677 A A 0.0000
678 E A -2.3426
679 T A -1.2440
680 V A 0.0000
681 L A 0.0000
682 T A -1.3181
683 P A -1.5493
684 D A -1.7925
685 E A 0.0000
686 C A -1.2224
687 Q A -1.4734
688 L A 0.0000
689 L A 0.0000
690 G A -0.8231
691 Y A 0.4318
692 L A -0.2807
693 D A 0.0000
694 K A -2.3338
695 G A -2.5982
696 K A -3.7527
697 R A -4.5617
698 K A -4.3413
699 R A -4.2362
700 K A -3.7762
701 E A 0.0000
702 K A -3.2205
703 A A -1.7797
704 G A -1.3629
705 S A 0.0000
706 L A 0.0000
707 Q A -1.4503
708 W A 0.0000
709 A A 0.0000
710 Y A 0.0000
711 M A 0.0000
712 A A 0.0000
713 I A 0.0000
714 A A 0.0000
715 R A -0.5414
716 L A -0.0814
717 G A -0.6332
718 G A -0.4467
719 F A 0.2200
720 M A 0.3239
721 D A -1.0657
722 S A -1.4214
723 K A -2.5626
724 R A -2.6269
725 T A -1.3811
726 G A -0.7024
727 I A 0.2444
728 A A 0.3675
729 S A 0.0017
730 W A -0.3446
731 G A -0.5404
732 A A 0.0000
733 L A 0.0000
734 W A -0.6809
735 E A -1.4587
736 G A 0.0000
737 W A 0.0000
738 E A -0.9759
739 A A -0.7229
740 L A 0.0000
741 Q A -1.3851
742 S A -1.4145
743 K A -1.7067
744 L A 0.0000
745 D A -2.2260
746 G A -1.7447
747 F A -1.4193
748 L A -1.0605
749 A A -1.0085
750 A A -0.6998
751 K A -1.8937
752 D A -1.9827
753 L A -0.2446
754 M A -0.0913
755 A A -1.1341
756 Q A -1.4311
757 G A -0.6265
758 I A 0.3329
759 K A -0.1243
760 I A 1.5454
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Automated mutations analysis

In the automated mutations mode, the server selects aggregation prone resides and each selected residue is mutated to glutamic acid, lysine, aspartic acid and arginine. The table below shows 2 best scored mutants for each mutated residue. Protein variants are ordered according to the mutation effect they had on protein stability (energetic effect) together with the difference in the average per-residue aggregation score between the wild type and the mutant (in the table green values indicate a positive change, grey are neutral, and orange/red mean destabilizing or more aggregation prone mutants).
Summary for all the mutants can be found in this CSV file.

Mutant
Energetic effect
Score comparison
LR3A -0.3899 -0.0001 View CSV PDB
LE4A -0.1749 0.0002 View CSV PDB
LR4A -0.6681 0.0016 View CSV PDB
LR6A -0.4782 0.0022 View CSV PDB
LD1A -0.8359 0.0052 View CSV PDB
LE1A -0.4847 0.0051 View CSV PDB
LD3A -0.0809 0.0021 View CSV PDB
LD2A -0.0408 0.0034 View CSV PDB
LE5A 0.6287 0.0002 View CSV PDB
LR5A 0.0355 0.0015 View CSV PDB
LE6A 0.4904 0.0009 View CSV PDB
LE2A 0.0398 0.0033 View CSV PDB
 

Laboratory of Theory of Biopolymers 2018