| Chain sequence(s) |
B: MSAIKNEQEKEIKNVTANYAVAAAKAKDAAEAAKLKAQAAAEIAKIKAE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:44)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 0.6961 | |
| 2 | S | B | -0.4125 | |
| 3 | A | B | -0.6617 | |
| 4 | I | B | -0.6560 | |
| 5 | K | B | -3.1192 | |
| 6 | N | B | -3.7059 | |
| 7 | E | B | -4.1525 | |
| 8 | Q | B | -4.4663 | |
| 9 | E | B | -5.1152 | |
| 10 | K | B | -5.3038 | |
| 11 | E | B | -4.9175 | |
| 12 | I | B | -3.7709 | |
| 13 | K | B | -4.0736 | |
| 14 | N | B | -3.5120 | |
| 15 | V | B | -2.1410 | |
| 16 | T | B | -1.6469 | |
| 17 | A | B | -1.1534 | |
| 18 | N | B | -1.1584 | |
| 19 | Y | B | -0.9242 | |
| 20 | A | B | -0.1614 | |
| 21 | V | B | 0.6877 | |
| 22 | A | B | -0.5678 | |
| 23 | A | B | -1.3163 | |
| 24 | A | B | -0.7826 | |
| 25 | K | B | -2.0452 | |
| 26 | A | B | -2.3714 | |
| 27 | K | B | -3.1948 | |
| 28 | D | B | -3.1266 | |
| 29 | A | B | -1.6904 | |
| 30 | A | B | -1.8310 | |
| 31 | E | B | -2.9282 | |
| 32 | A | B | -2.3937 | |
| 33 | A | B | -1.9321 | |
| 34 | K | B | -2.6976 | |
| 35 | L | B | -2.0304 | |
| 36 | K | B | -2.4025 | |
| 37 | A | B | -1.8667 | |
| 38 | Q | B | -2.0405 | |
| 39 | A | B | 0.0000 | |
| 40 | A | B | -1.0501 | |
| 41 | A | B | -1.3037 | |
| 42 | E | B | -1.8303 | |
| 43 | I | B | -1.7487 | |
| 44 | A | B | -1.6461 | |
| 45 | K | B | -2.6386 | |
| 46 | I | B | -2.7224 | |
| 47 | K | B | -3.2967 | |
| 48 | A | B | -2.2069 | |
| 49 | E | B | -2.5106 |