Project name: fold_rfinf_26_22024_10_30_13_29_model_0

Status: done

Started: 2026-03-26 12:02:36
Settings
Chain sequence(s) B: MSAIKNEQEKEIKNVTANYAVAAAKAKDAAEAAKLKAQAAAEIAKIKAE
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:44)
Show buried residues

Minimal score value
-5.3038
Maximal score value
0.6961
Average score
-2.16
Total score value
-105.8405

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M B 0.6961
2 S B -0.4125
3 A B -0.6617
4 I B -0.6560
5 K B -3.1192
6 N B -3.7059
7 E B -4.1525
8 Q B -4.4663
9 E B -5.1152
10 K B -5.3038
11 E B -4.9175
12 I B -3.7709
13 K B -4.0736
14 N B -3.5120
15 V B -2.1410
16 T B -1.6469
17 A B -1.1534
18 N B -1.1584
19 Y B -0.9242
20 A B -0.1614
21 V B 0.6877
22 A B -0.5678
23 A B -1.3163
24 A B -0.7826
25 K B -2.0452
26 A B -2.3714
27 K B -3.1948
28 D B -3.1266
29 A B -1.6904
30 A B -1.8310
31 E B -2.9282
32 A B -2.3937
33 A B -1.9321
34 K B -2.6976
35 L B -2.0304
36 K B -2.4025
37 A B -1.8667
38 Q B -2.0405
39 A B 0.0000
40 A B -1.0501
41 A B -1.3037
42 E B -1.8303
43 I B -1.7487
44 A B -1.6461
45 K B -2.6386
46 I B -2.7224
47 K B -3.2967
48 A B -2.2069
49 E B -2.5106
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Laboratory of Theory of Biopolymers 2018