| Chain sequence(s) |
L: DMFAKLKEKFFNEIN
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1290 | D | L | -1.6013 | |
| 1291 | M | L | 1.0725 | |
| 1292 | F | L | 1.9934 | |
| 1293 | A | L | 0.0329 | |
| 1294 | K | L | -0.9993 | |
| 1295 | L | L | 0.8026 | |
| 1296 | K | L | -1.0149 | |
| 1297 | E | L | -2.1238 | |
| 1298 | K | L | -1.4143 | |
| 1299 | F | L | 1.4216 | |
| 1300 | F | L | 1.0358 | |
| 1301 | N | L | -1.3969 | |
| 1302 | E | L | -1.5212 | |
| 1303 | I | L | 1.4529 | |
| 1304 | N | L | -0.9081 |