| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFVIVYSEPDVCGEAIVLTVPGSERSYDLTGLKPGTEYWVRIAGVKGGDFSRPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9185 | |
| 2 | L | A | 0.3324 | |
| 3 | P | A | -0.1588 | |
| 4 | A | A | 0.0000 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.0095 | |
| 7 | N | A | -1.4087 | |
| 8 | L | A | -0.3002 | |
| 9 | V | A | 1.1629 | |
| 10 | V | A | 0.6004 | |
| 11 | S | A | -0.6285 | |
| 12 | R | A | -2.0282 | |
| 13 | V | A | -1.1836 | |
| 14 | T | A | -1.9983 | |
| 15 | E | A | -3.3258 | |
| 16 | D | A | -3.2440 | |
| 17 | S | A | -2.2768 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1587 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3172 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2260 | |
| 24 | A | A | -1.3455 | |
| 25 | P | A | -1.2893 | |
| 26 | D | A | -2.2350 | |
| 27 | A | A | -1.3778 | |
| 28 | A | A | 0.0000 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.6448 | |
| 31 | S | A | -1.1477 | |
| 32 | F | A | 0.0000 | |
| 33 | V | A | 0.7890 | |
| 34 | I | A | 0.0000 | |
| 35 | V | A | 0.7094 | |
| 36 | Y | A | 0.6388 | |
| 37 | S | A | 0.0348 | |
| 38 | E | A | -0.6779 | |
| 39 | P | A | -0.6120 | |
| 40 | D | A | -1.1682 | |
| 41 | V | A | 0.2692 | |
| 42 | C | A | 0.2560 | |
| 43 | G | A | -0.7532 | |
| 44 | E | A | -1.1262 | |
| 45 | A | A | 0.1334 | |
| 46 | I | A | 1.1652 | |
| 47 | V | A | 2.0400 | |
| 48 | L | A | 1.4112 | |
| 49 | T | A | 0.6248 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1300 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.6290 | |
| 54 | E | A | -1.6364 | |
| 55 | R | A | -1.2053 | |
| 56 | S | A | -0.6667 | |
| 57 | Y | A | -0.7120 | |
| 58 | D | A | -1.4331 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4138 | |
| 61 | G | A | -1.6523 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.1553 | |
| 64 | P | A | -2.6922 | |
| 65 | G | A | -1.8504 | |
| 66 | T | A | -1.9175 | |
| 67 | E | A | -1.0619 | |
| 68 | Y | A | 0.0000 | |
| 69 | W | A | 0.6257 | |
| 70 | V | A | 0.0000 | |
| 71 | R | A | -0.7794 | |
| 72 | I | A | 0.0000 | |
| 73 | A | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.8844 | |
| 76 | K | A | -1.7996 | |
| 77 | G | A | -1.6727 | |
| 78 | G | A | -1.5385 | |
| 79 | D | A | -1.6204 | |
| 80 | F | A | 0.5321 | |
| 81 | S | A | 0.0000 | |
| 82 | R | A | -1.6663 | |
| 83 | P | A | -1.0654 | |
| 84 | L | A | -1.1965 | |
| 85 | S | A | -0.1512 | |
| 86 | A | A | 0.9119 | |
| 87 | I | A | 1.7598 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.6039 | |
| 90 | T | A | -1.9735 |