Project name: query_structure

Status: done

Started: 2026-03-16 21:46:04
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFVIVYSEPDVCGEAIVLTVPGSERSYDLTGLKPGTEYWVRIAGVKGGDFSRPLSAIFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:44)
Show buried residues

Minimal score value
-3.3258
Maximal score value
2.04
Average score
-0.6426
Total score value
-57.8341

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.9185
2 L A 0.3324
3 P A -0.1588
4 A A 0.0000
5 P A 0.0000
6 K A -2.0095
7 N A -1.4087
8 L A -0.3002
9 V A 1.1629
10 V A 0.6004
11 S A -0.6285
12 R A -2.0282
13 V A -1.1836
14 T A -1.9983
15 E A -3.3258
16 D A -3.2440
17 S A -2.2768
18 A A 0.0000
19 R A -1.1587
20 L A 0.0000
21 S A -0.3172
22 W A 0.0000
23 T A -1.2260
24 A A -1.3455
25 P A -1.2893
26 D A -2.2350
27 A A -1.3778
28 A A 0.0000
29 F A 0.0000
30 D A -2.6448
31 S A -1.1477
32 F A 0.0000
33 V A 0.7890
34 I A 0.0000
35 V A 0.7094
36 Y A 0.6388
37 S A 0.0348
38 E A -0.6779
39 P A -0.6120
40 D A -1.1682
41 V A 0.2692
42 C A 0.2560
43 G A -0.7532
44 E A -1.1262
45 A A 0.1334
46 I A 1.1652
47 V A 2.0400
48 L A 1.4112
49 T A 0.6248
50 V A 0.0000
51 P A -1.1300
52 G A 0.0000
53 S A -1.6290
54 E A -1.6364
55 R A -1.2053
56 S A -0.6667
57 Y A -0.7120
58 D A -1.4331
59 L A 0.0000
60 T A -1.4138
61 G A -1.6523
62 L A 0.0000
63 K A -3.1553
64 P A -2.6922
65 G A -1.8504
66 T A -1.9175
67 E A -1.0619
68 Y A 0.0000
69 W A 0.6257
70 V A 0.0000
71 R A -0.7794
72 I A 0.0000
73 A A 0.0000
74 G A 0.0000
75 V A -0.8844
76 K A -1.7996
77 G A -1.6727
78 G A -1.5385
79 D A -1.6204
80 F A 0.5321
81 S A 0.0000
82 R A -1.6663
83 P A -1.0654
84 L A -1.1965
85 S A -0.1512
86 A A 0.9119
87 I A 1.7598
88 F A 0.0000
89 T A -0.6039
90 T A -1.9735
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Laboratory of Theory of Biopolymers 2018