| Chain sequence(s) |
A: GCRFCCNCCPNMSGCGVCCRF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:14)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6675 | |
| 2 | C | A | 0.4086 | |
| 3 | R | A | -0.0315 | |
| 4 | F | A | 2.1966 | |
| 5 | C | A | 1.5113 | |
| 6 | C | A | 1.2785 | |
| 7 | N | A | -0.1606 | |
| 8 | C | A | 0.8974 | |
| 9 | C | A | 0.5319 | |
| 10 | P | A | -0.3053 | |
| 11 | N | A | -0.8022 | |
| 12 | M | A | 0.4115 | |
| 13 | S | A | -0.0830 | |
| 14 | G | A | 0.0144 | |
| 15 | C | A | 1.4988 | |
| 16 | G | A | 1.6710 | |
| 17 | V | A | 2.3971 | |
| 18 | C | A | 1.2722 | |
| 19 | C | A | 0.6329 | |
| 20 | R | A | -0.4893 | |
| 21 | F | A | 1.0600 |