| Chain sequence(s) |
A: PAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVITVERDDN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 25 | P | A | -0.8131 | |
| 26 | A | A | -0.7789 | |
| 27 | K | A | -1.7834 | |
| 28 | R | A | -2.6722 | |
| 29 | Y | A | 0.0000 | |
| 30 | R | A | -2.7885 | |
| 31 | I | A | 0.0000 | |
| 32 | T | A | -1.7382 | |
| 33 | M | A | 0.0000 | |
| 34 | K | A | -0.8567 | |
| 35 | N | A | -0.0088 | |
| 36 | L | A | 0.9359 | |
| 37 | P | A | 0.2565 | |
| 38 | E | A | 0.0000 | |
| 39 | G | A | -1.3250 | |
| 40 | C | A | 0.0000 | |
| 41 | S | A | -1.1435 | |
| 42 | W | A | -0.8871 | |
| 43 | Q | A | -1.8393 | |
| 44 | D | A | -1.6877 | |
| 45 | L | A | 0.0000 | |
| 46 | K | A | -2.3411 | |
| 47 | D | A | -2.7051 | |
| 48 | L | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | R | A | -3.6441 | |
| 51 | E | A | -3.3243 | |
| 52 | N | A | -2.7209 | |
| 53 | S | A | -2.2046 | |
| 54 | L | A | 0.0000 | |
| 55 | E | A | -2.0714 | |
| 56 | T | A | 0.0000 | |
| 57 | T | A | 0.2716 | |
| 58 | F | A | 0.7766 | |
| 59 | S | A | 0.1320 | |
| 60 | S | A | -0.3364 | |
| 61 | V | A | -1.2495 | |
| 62 | N | A | -2.2921 | |
| 63 | T | A | -2.0533 | |
| 64 | R | A | -3.2802 | |
| 65 | D | A | -2.8218 | |
| 66 | F | A | -0.8834 | |
| 67 | D | A | -2.1509 | |
| 68 | G | A | 0.0000 | |
| 69 | T | A | -1.2892 | |
| 70 | G | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | L | A | 0.0000 | |
| 73 | E | A | 0.0000 | |
| 74 | F | A | -0.7603 | |
| 75 | P | A | -1.3319 | |
| 76 | S | A | -1.2676 | |
| 77 | E | A | -1.7729 | |
| 78 | E | A | -1.6849 | |
| 79 | I | A | -1.0959 | |
| 80 | L | A | 0.0000 | |
| 81 | V | A | -0.4865 | |
| 82 | E | A | -1.7247 | |
| 83 | A | A | 0.0000 | |
| 84 | L | A | -1.9665 | |
| 85 | E | A | -2.8980 | |
| 86 | R | A | -3.0376 | |
| 87 | L | A | 0.0000 | |
| 88 | N | A | -2.9188 | |
| 89 | N | A | -2.3733 | |
| 90 | I | A | -2.0692 | |
| 91 | E | A | -2.4730 | |
| 92 | F | A | 0.0000 | |
| 93 | R | A | -2.4970 | |
| 94 | G | A | -1.7538 | |
| 95 | S | A | -1.0936 | |
| 96 | V | A | -1.2275 | |
| 97 | I | A | 0.0000 | |
| 98 | T | A | -1.4981 | |
| 99 | V | A | 0.0000 | |
| 100 | E | A | -3.1533 | |
| 101 | R | A | -3.9128 | |
| 102 | D | A | -3.9437 | |
| 103 | D | A | -4.0802 | |
| 104 | N | A | -3.5395 |