Project name: RVAC_29_03_2026 [mutate: YH5A] [mutate: LM15A] [mutate: TD16A] [mutate: VI54A] [mutate: YK55A] [mutate: YK72A] [mutate: LV102A]

Status: done

Started: 2026-04-02 11:38:30
Settings
Chain sequence(s) A: MDTPHANSTQEEPFMDSTLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGSIKFKEYTDIASFSVDPQLKCDYNIVLMKYDSNLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LV102A
Energy difference between WT (input) and mutated protein (by FoldX) 1.87723 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:01:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:05)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:09)
Show buried residues

Minimal score value
-3.2558
Maximal score value
2.6181
Average score
-0.6608
Total score value
-174.4578

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1615
2 D A -1.5207
3 T A -1.0356
4 P A -1.3048
5 H A -1.7371
6 A A -1.1988
7 N A -1.8904
8 S A -1.7193
9 T A -2.0739
10 Q A -3.0302
11 E A -3.2558
12 E A -3.1823
13 P A -2.2026
14 F A -1.1827
15 M A -0.7650
16 D A -1.6582
17 S A 0.0000
18 T A -1.0353
19 L A 0.0000
20 C A 0.0000
21 L A 0.0000
22 Y A 0.0000
23 Y A 0.0000
24 P A 0.0000
25 T A -0.8448
26 E A -1.0672
27 A A 0.0000
28 A A -0.9887
29 T A -1.1065
30 E A -1.3330
31 I A 0.0000
32 N A -2.0876
33 D A -2.0813
34 T A -1.9700
35 E A -3.0366
36 W A 0.0000
37 K A -2.3534
38 D A -2.9644
39 T A -1.8835
40 L A 0.0000
41 S A -1.6130
42 Q A -1.4423
43 L A -0.5604
44 F A 0.0000
45 L A -0.1125
46 T A -0.3907
47 K A -0.6844
48 G A -0.3121
49 W A 0.0000
50 P A -0.3891
51 T A -0.7270
52 G A -0.6739
53 S A -0.6726
54 I A 0.0000
55 K A -1.3667
56 F A 0.0000
57 K A -1.4233
58 E A -1.3279
59 Y A 0.0000
60 T A -0.7041
61 D A -0.9049
62 I A 0.0000
63 A A 0.0000
64 S A -0.6103
65 F A 0.0000
66 S A 0.0000
67 V A -0.2867
68 D A -1.8161
69 P A -1.5825
70 Q A -2.1894
71 L A 0.0000
72 K A -2.1713
73 C A 0.0000
74 D A -1.6303
75 Y A 0.0000
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 L A 0.0000
80 M A 0.0000
81 K A -0.7798
82 Y A -1.0461
83 D A -1.5275
84 S A -1.7682
85 N A -1.8656
86 L A -1.7464
87 E A -2.8040
88 L A 0.0000
89 D A -2.4847
90 M A 0.0000
91 S A -1.2005
92 E A -1.2047
93 L A 0.0000
94 A A 0.0000
95 D A -1.4107
96 L A 0.0000
97 I A 0.0000
98 L A 0.0000
99 N A -0.7514
100 E A -0.6430
101 W A -0.1865
102 V A 0.8357 mutated: LV102A
103 C A -0.0877
104 N A -1.4090
105 P A -1.3751
106 M A 0.0000
107 D A -0.5184
108 I A 0.3708
109 T A 0.7687
110 L A 2.0339
111 Y A 2.0367
112 Y A 1.3012
113 Y A 0.2649
114 Q A -0.9138
115 Q A 0.0000
116 T A -1.6757
117 D A -2.6294
118 E A -2.9266
119 A A -1.9336
120 N A 0.0000
121 K A -1.9604
122 W A 0.0000
123 I A 0.0000
124 S A 0.0000
125 M A 0.0000
126 G A -0.8268
127 S A -0.8428
128 S A -0.8933
129 C A 0.0000
130 T A -0.6215
131 I A 0.0000
132 K A -1.7363
133 V A 0.0000
134 C A 0.0000
135 P A 0.5386
136 L A 0.0000
137 N A -0.3027
138 T A -0.7691
139 Q A -1.0875
140 T A -0.0903
141 L A 1.0666
142 G A 1.1782
143 I A 1.9143
144 G A 0.6264
145 C A 0.6576
146 L A 1.4983
147 T A 0.6825
148 T A 0.0096
149 D A -0.6062
150 T A -1.2960
151 N A -1.8696
152 T A -1.1665
153 F A 0.0000
154 E A -2.7652
155 E A -2.3603
156 V A -0.6704
157 A A 0.0000
158 T A -0.5474
159 A A -0.5852
160 E A -1.5418
161 K A -1.4916
162 L A 0.0000
163 V A 0.0000
164 I A -0.4353
165 T A 0.0000
166 D A -1.8006
167 V A -0.6730
168 V A 0.0447
169 D A -2.1229
170 G A -1.1673
171 V A -0.4006
172 N A -0.4442
173 H A 0.0000
174 K A 0.3396
175 L A 0.0000
176 D A -1.2392
177 V A 0.0000
178 T A -0.6428
179 T A -0.8054
180 N A -1.3944
181 T A -0.9117
182 C A 0.0000
183 T A -0.6939
184 I A 0.0000
185 R A -1.2034
186 N A -1.2029
187 C A 0.0000
188 K A -1.4227
189 K A -1.0662
190 L A 0.2089
191 G A -0.5214
192 P A -1.2596
193 R A -1.3548
194 E A -2.0241
195 N A -1.3343
196 V A 0.0000
197 A A 0.0000
198 V A 0.0000
199 I A 0.0000
200 Q A 0.0000
201 V A 0.0000
202 G A -1.2272
203 G A -0.8842
204 S A -0.4183
205 N A -0.6846
206 I A 0.9778
207 L A 0.3053
208 D A -0.9707
209 I A -0.7627
210 T A -0.6967
211 A A -1.2377
212 D A -1.9580
213 P A -1.5002
214 T A -0.9080
215 T A -0.8528
216 A A -0.8621
217 P A -1.3060
218 Q A -1.9954
219 T A -1.5342
220 E A -2.4161
221 R A -1.4726
222 M A 0.0000
223 M A -0.6861
224 R A -0.9711
225 I A 0.0000
226 N A -1.8249
227 W A -1.4658
228 K A -2.2258
229 K A -1.7855
230 W A 0.0000
231 W A -0.4429
232 Q A -0.8268
233 V A 0.0000
234 F A 0.0000
235 Y A 0.2670
236 T A -0.2120
237 V A 0.0000
238 V A 0.0000
239 D A -1.3774
240 Y A -0.3409
241 V A 0.0000
242 N A -1.0893
243 Q A -0.9991
244 I A -0.3694
245 V A 0.0000
246 Q A -1.0161
247 V A 0.0215
248 M A 0.0000
249 S A -1.3301
250 K A -1.9232
251 R A -2.2984
252 S A -1.6786
253 R A -2.0454
254 S A -1.3888
255 L A 0.2461
256 N A -0.5096
257 S A -0.0667
258 A A 0.4830
259 A A 1.4158
260 F A 2.5826
261 Y A 2.6181
262 Y A 2.0962
263 R A 0.2966
264 V A 1.3961
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Laboratory of Theory of Biopolymers 2018