Project name: query_structure

Status: done

Started: 2026-03-17 00:26:29
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Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAGSGRTFSSYNMGWFRQAPGKEREFVGGISWTGRSADYPDSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAATQRGYSANQGVYADWGQGTQVTVSSGAAEPEA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:23)
Show buried residues

Minimal score value
-3.824
Maximal score value
1.4212
Average score
-1.0017
Total score value
-130.2249

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -2.0426
2 V A 0.0000
3 Q A -2.2082
4 L A 0.0000
5 Q A -1.6250
6 E A 0.0000
7 S A -1.1742
8 G A -1.0074
9 G A -0.8333
10 G A -0.0639
11 L A 1.0492
12 V A -0.0220
13 Q A -1.3298
14 A A -1.5233
15 G A -1.3862
16 G A -0.9232
17 S A -1.2605
18 L A -1.0586
19 R A -2.1231
20 L A 0.0000
21 S A -0.8297
22 C A 0.0000
23 A A -1.1149
24 G A -1.5847
25 S A -1.6470
26 G A -2.1422
27 R A -2.5015
28 T A -1.2914
29 F A 0.0000
30 S A -0.9931
31 S A -1.0094
32 Y A -0.8227
33 N A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A -0.8208
38 R A -1.7516
39 Q A -2.4209
40 A A -2.2201
41 P A -1.4452
42 G A -1.9538
43 K A -3.5240
44 E A -3.8240
45 R A -3.2689
46 E A -2.9871
47 F A -1.2722
48 V A 0.0000
49 G A 0.0000
50 G A 0.0000
51 I A 0.0000
52 S A -0.9774
53 W A -0.7260
54 T A -0.7588
55 G A -1.2836
56 R A -2.0274
57 S A -1.3099
58 A A -0.9714
59 D A -1.2616
60 Y A -1.3168
61 P A -1.8093
62 D A -2.6155
63 S A -1.6410
64 V A 0.0000
65 K A -2.7850
66 G A -1.8305
67 R A -1.4305
68 F A 0.0000
69 T A -0.9512
70 I A 0.0000
71 S A -0.6478
72 R A -1.1198
73 D A -1.4809
74 N A -1.6082
75 A A -1.3924
76 K A -2.3119
77 N A -1.8937
78 A A 0.0000
79 V A 0.0000
80 Y A -0.5557
81 L A 0.0000
82 Q A -1.2240
83 M A 0.0000
84 N A -1.4428
85 S A -1.2281
86 L A 0.0000
87 K A -2.2026
88 P A -1.8473
89 E A -2.2655
90 D A 0.0000
91 T A -0.9442
92 A A 0.0000
93 V A -0.7298
94 Y A 0.0000
95 Y A -0.6823
96 C A 0.0000
97 A A 0.0000
98 A A 0.0000
99 T A 0.0000
100 Q A -1.3602
101 R A -2.1645
102 G A -1.0779
103 Y A -0.1386
104 S A -0.7340
105 A A -0.7575
106 N A -1.1037
107 Q A -1.0136
108 G A -0.0958
109 V A 1.4212
110 Y A 0.0000
111 A A 0.3737
112 D A 0.0000
113 W A -0.1855
114 G A -0.9631
115 Q A -1.6105
116 G A -1.0433
117 T A 0.0000
118 Q A -1.2428
119 V A 0.0000
120 T A -0.2752
121 V A 0.0000
122 S A -0.8259
123 S A -1.1896
124 G A -1.2108
125 A A -1.3302
126 A A -1.3400
127 E A -2.4963
128 P A -1.9759
129 E A -2.4401
130 A A -1.2146
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Laboratory of Theory of Biopolymers 2018