| Chain sequence(s) |
A: ESCVFIPCISSIVGCSCKSKVCYKNGSIPCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -0.2432 | |
| 2 | S | A | 0.2576 | |
| 3 | C | A | 0.9623 | |
| 4 | V | A | 1.3775 | |
| 5 | F | A | 2.6940 | |
| 6 | I | A | 2.6265 | |
| 7 | P | A | 1.6774 | |
| 8 | C | A | 0.0000 | |
| 9 | I | A | 2.7676 | |
| 10 | S | A | 1.9184 | |
| 11 | S | A | 1.8275 | |
| 12 | I | A | 3.1268 | |
| 13 | V | A | 2.6799 | |
| 14 | G | A | 0.7207 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.3180 | |
| 17 | C | A | -0.4979 | |
| 18 | K | A | -1.8647 | |
| 19 | S | A | -1.3161 | |
| 20 | K | A | -1.2278 | |
| 21 | V | A | -0.7480 | |
| 22 | C | A | 0.0000 | |
| 23 | Y | A | -0.8524 | |
| 24 | K | A | -1.0407 | |
| 25 | N | A | -1.6613 | |
| 26 | G | A | -1.2447 | |
| 27 | S | A | -0.5277 | |
| 28 | I | A | 0.4257 | |
| 29 | P | A | -0.2096 | |
| 30 | C | A | 0.1263 | |
| 31 | G | A | -0.5314 |