| Chain sequence(s) |
A: GPLPLNPEPELRSTDEFVTPTDLLYIAETDLLEETGHPTKDIVENGKVVVPKVSAYQWRVFKLTLPDPNKLALPSSDFIDKSTEILIWRLLAFKIHVYGPLGEGEYGHPNFNKFGDVDNPTSYQHETADDTTNLSWRPKLKQSFLIGDLPPLGKYTAPAPPAPGLPPGARPPTTTVTTIIEDGDMADIGFGARDYAALDPTKNNVPDIIRDTTTKVPDLEGMKAEPYGRRLFTHDSYEKSKVVKNYRLDGPDLEPLPSTPPPSPLYVPPPKSSPYAVPPPTNLFSLPDAGEIKEEDLLFNKPVFLEETPGLNNGILWHNQLYITVLDNRRAEIEEIRTKISTPLPNVYNPENYVTSKRHTRGYRLSLIIQLCKIPLTPETLALLERIDRRILVEAELPFIPKEVYPDPYAGKKFHEIDLTNKLSSDLEKYELGRAYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2085 | |
| 2 | P | A | 0.4108 | |
| 3 | L | A | 1.3887 | |
| 4 | P | A | 0.7031 | |
| 5 | L | A | 0.8484 | |
| 6 | N | A | -0.9948 | |
| 7 | P | A | -1.7200 | |
| 8 | E | A | -2.6880 | |
| 9 | P | A | -2.7667 | |
| 10 | E | A | -2.8564 | |
| 11 | L | A | -1.8508 | |
| 12 | R | A | -2.6822 | |
| 13 | S | A | -2.0011 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.0968 | |
| 16 | E | A | -3.0327 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9553 | |
| 20 | P | A | -0.9582 | |
| 21 | T | A | -0.9079 | |
| 22 | D | A | -1.6342 | |
| 23 | L | A | -0.5218 | |
| 24 | L | A | -0.2454 | |
| 25 | Y | A | -0.1533 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9076 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.7959 | |
| 31 | L | A | -0.5466 | |
| 32 | L | A | -0.9047 | |
| 33 | E | A | -1.8947 | |
| 34 | E | A | -1.2378 | |
| 35 | T | A | -0.8098 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.4112 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5013 | |
| 40 | K | A | -2.1221 | |
| 41 | D | A | -1.2065 | |
| 42 | I | A | 0.3862 | |
| 43 | V | A | 0.5904 | |
| 44 | E | A | -1.5469 | |
| 45 | N | A | -2.0918 | |
| 46 | G | A | -1.4138 | |
| 47 | K | A | -1.2501 | |
| 48 | V | A | 0.9530 | |
| 49 | V | A | 1.2879 | |
| 50 | V | A | 0.5771 | |
| 51 | P | A | -0.2235 | |
| 52 | K | A | -1.1498 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.3416 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2957 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2904 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.6999 | |
| 70 | K | A | -1.7955 | |
| 71 | L | A | -0.5953 | |
| 72 | A | A | -0.1573 | |
| 73 | L | A | -0.1784 | |
| 74 | P | A | -0.3121 | |
| 75 | S | A | -0.7463 | |
| 76 | S | A | -1.2359 | |
| 77 | D | A | -2.3157 | |
| 78 | F | A | -1.2372 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -2.9800 | |
| 81 | K | A | -2.9152 | |
| 82 | S | A | -1.7030 | |
| 83 | T | A | -1.3681 | |
| 84 | E | A | -1.6284 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.2922 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2542 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.5487 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.0557 | |
| 99 | G | A | -0.3673 | |
| 100 | P | A | -0.3835 | |
| 101 | L | A | -0.2663 | |
| 102 | G | A | -0.8926 | |
| 103 | E | A | -1.8891 | |
| 104 | G | A | 0.0000 | |
| 105 | E | A | -2.4464 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -1.1982 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.5447 | |
| 110 | N | A | -2.4393 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3926 | |
| 113 | K | A | -0.9385 | |
| 114 | F | A | -0.7433 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2009 | |
| 117 | V | A | -0.8326 | |
| 118 | D | A | -1.9539 | |
| 119 | N | A | -2.1040 | |
| 120 | P | A | -1.2865 | |
| 121 | T | A | -0.7470 | |
| 122 | S | A | -0.5853 | |
| 123 | Y | A | -0.1116 | |
| 124 | Q | A | -1.1943 | |
| 125 | H | A | -1.4826 | |
| 126 | E | A | -1.9011 | |
| 127 | T | A | -1.4326 | |
| 128 | A | A | -1.1291 | |
| 129 | D | A | -2.3002 | |
| 130 | D | A | -1.7366 | |
| 131 | T | A | -1.6429 | |
| 132 | T | A | -1.5725 | |
| 133 | N | A | -1.8585 | |
| 134 | L | A | -0.9429 | |
| 135 | S | A | -1.0211 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -1.2802 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | S | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.0649 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.0695 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.4743 | |
| 155 | Y | A | -0.6198 | |
| 156 | T | A | -0.6443 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.3986 | |
| 159 | A | A | -0.2867 | |
| 160 | P | A | -0.4745 | |
| 161 | P | A | -0.6161 | |
| 162 | A | A | -0.2340 | |
| 163 | P | A | -0.3902 | |
| 164 | G | A | -0.3722 | |
| 165 | L | A | -0.1964 | |
| 166 | P | A | -0.5609 | |
| 167 | P | A | -0.7537 | |
| 168 | G | A | -0.7549 | |
| 169 | A | A | -0.8689 | |
| 170 | R | A | -1.9455 | |
| 171 | P | A | -1.2051 | |
| 172 | P | A | -0.7195 | |
| 173 | T | A | -0.5755 | |
| 174 | T | A | -0.2011 | |
| 175 | T | A | -0.1914 | |
| 176 | V | A | -0.0107 | |
| 177 | T | A | -0.0016 | |
| 178 | T | A | 0.0382 | |
| 179 | I | A | -0.2321 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1526 | |
| 182 | D | A | 0.0000 | |
| 183 | G | A | -0.6637 | |
| 184 | D | A | -0.6220 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.3691 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3209 | |
| 190 | F | A | -0.1887 | |
| 191 | G | A | -0.4839 | |
| 192 | A | A | -0.8224 | |
| 193 | R | A | -1.4317 | |
| 194 | D | A | -1.0869 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.0681 | |
| 197 | A | A | -0.5325 | |
| 198 | L | A | -0.6285 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -0.8678 | |
| 201 | T | A | -0.9807 | |
| 202 | K | A | -2.1646 | |
| 203 | N | A | -1.7025 | |
| 204 | N | A | -1.1918 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6555 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -1.8847 | |
| 211 | D | A | -2.0319 | |
| 212 | T | A | -1.1616 | |
| 213 | T | A | -0.9665 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | -0.0714 | |
| 217 | P | A | -0.1831 | |
| 218 | D | A | -0.8322 | |
| 219 | L | A | -1.1874 | |
| 220 | E | A | -2.3478 | |
| 221 | G | A | -1.6449 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.5204 | |
| 224 | A | A | -1.5370 | |
| 225 | E | A | -1.2378 | |
| 226 | P | A | -0.7248 | |
| 227 | Y | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4479 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7656 | |
| 234 | H | A | -0.7484 | |
| 235 | D | A | -1.0815 | |
| 236 | S | A | -0.9602 | |
| 237 | Y | A | -1.0100 | |
| 238 | E | A | -2.1064 | |
| 239 | K | A | -2.0461 | |
| 240 | S | A | -1.2909 | |
| 241 | K | A | -0.5031 | |
| 242 | V | A | 1.3351 | |
| 243 | V | A | 1.0653 | |
| 244 | K | A | -0.5073 | |
| 245 | N | A | -0.3857 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | L | A | -0.0391 | |
| 249 | D | A | -0.9727 | |
| 250 | G | A | -0.6485 | |
| 251 | P | A | -0.4851 | |
| 252 | D | A | -0.4700 | |
| 253 | L | A | -0.0220 | |
| 254 | E | A | -1.4400 | |
| 255 | P | A | -0.6922 | |
| 256 | L | A | 0.5977 | |
| 257 | P | A | -0.0188 | |
| 258 | S | A | 0.1933 | |
| 259 | T | A | 0.0850 | |
| 260 | P | A | -0.3490 | |
| 261 | P | A | -0.1890 | |
| 262 | P | A | 0.0912 | |
| 263 | S | A | 0.6500 | |
| 264 | P | A | 0.7237 | |
| 265 | L | A | 1.9561 | |
| 266 | Y | A | 1.7978 | |
| 267 | V | A | 1.9622 | |
| 268 | P | A | 0.9086 | |
| 269 | P | A | 0.2116 | |
| 270 | P | A | -0.7074 | |
| 271 | K | A | -1.5884 | |
| 272 | S | A | -1.0637 | |
| 273 | S | A | -0.3118 | |
| 274 | P | A | 0.0413 | |
| 275 | Y | A | 0.9032 | |
| 276 | A | A | 0.4889 | |
| 277 | V | A | 1.6329 | |
| 278 | P | A | 1.0017 | |
| 279 | P | A | -0.0151 | |
| 280 | P | A | -0.0944 | |
| 281 | T | A | -0.0969 | |
| 282 | N | A | 0.2418 | |
| 283 | L | A | 1.3721 | |
| 284 | F | A | 0.7689 | |
| 285 | S | A | 0.4286 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -2.2815 | |
| 292 | I | A | -1.8261 | |
| 293 | K | A | -2.8134 | |
| 294 | E | A | -3.2765 | |
| 295 | E | A | -3.1243 | |
| 296 | D | A | -2.1785 | |
| 297 | L | A | -1.3710 | |
| 298 | L | A | -0.8637 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3317 | |
| 301 | K | A | -1.8264 | |
| 302 | P | A | -0.9456 | |
| 303 | V | A | -0.0559 | |
| 304 | F | A | -0.3434 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5103 | |
| 307 | E | A | -2.8527 | |
| 308 | T | A | -1.3799 | |
| 309 | P | A | -0.9605 | |
| 310 | G | A | -0.7828 | |
| 311 | L | A | -0.8232 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7165 | |
| 319 | N | A | -0.5409 | |
| 320 | Q | A | -0.6236 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | R | A | 0.0000 | |
| 330 | R | A | -0.5610 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -2.5226 | |
| 333 | I | A | -2.2220 | |
| 334 | E | A | -2.8065 | |
| 335 | E | A | -2.8196 | |
| 336 | I | A | -0.7939 | |
| 337 | R | A | -1.4943 | |
| 338 | T | A | -0.5683 | |
| 339 | K | A | -0.9662 | |
| 340 | I | A | 1.0105 | |
| 341 | S | A | 0.0866 | |
| 342 | T | A | -0.1499 | |
| 343 | P | A | -0.3883 | |
| 344 | L | A | 0.1376 | |
| 345 | P | A | -0.0028 | |
| 346 | N | A | -0.2474 | |
| 347 | V | A | 1.6171 | |
| 348 | Y | A | 1.2892 | |
| 349 | N | A | -0.3658 | |
| 350 | P | A | -0.7851 | |
| 351 | E | A | -1.5171 | |
| 352 | N | A | -0.6509 | |
| 353 | Y | A | 0.0229 | |
| 354 | V | A | 0.9578 | |
| 355 | T | A | -0.6153 | |
| 356 | S | A | -0.9632 | |
| 357 | K | A | -2.0965 | |
| 358 | R | A | -1.7407 | |
| 359 | H | A | 0.0000 | |
| 360 | T | A | -1.0821 | |
| 361 | R | A | 0.0000 | |
| 362 | G | A | 0.0000 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -0.9699 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3351 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6202 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8653 | |
| 376 | L | A | -0.5983 | |
| 377 | T | A | -0.7074 | |
| 378 | P | A | -1.0374 | |
| 379 | E | A | -1.9599 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.8402 | |
| 382 | A | A | -1.4062 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.8778 | |
| 386 | R | A | -1.9724 | |
| 387 | I | A | -1.0108 | |
| 388 | D | A | -1.2035 | |
| 389 | R | A | -1.7199 | |
| 390 | R | A | -1.0586 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.5739 | |
| 394 | E | A | -2.3187 | |
| 395 | A | A | -1.6975 | |
| 396 | E | A | -2.3637 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.0807 | |
| 399 | F | A | 1.4725 | |
| 400 | I | A | -0.0470 | |
| 401 | P | A | -0.7490 | |
| 402 | K | A | -1.9690 | |
| 403 | E | A | -0.8696 | |
| 404 | V | A | 0.8152 | |
| 405 | Y | A | 0.2057 | |
| 406 | P | A | -0.3732 | |
| 407 | D | A | -1.4332 | |
| 408 | P | A | -1.0368 | |
| 409 | Y | A | -1.0995 | |
| 410 | A | A | -1.2771 | |
| 411 | G | A | -1.5055 | |
| 412 | K | A | -2.1642 | |
| 413 | K | A | -2.6175 | |
| 414 | F | A | -1.6943 | |
| 415 | H | A | -1.6040 | |
| 416 | E | A | -2.5750 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.6105 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3803 | |
| 421 | N | A | -1.7746 | |
| 422 | K | A | -1.5933 | |
| 423 | L | A | -0.5794 | |
| 424 | S | A | -0.8666 | |
| 425 | S | A | -1.0625 | |
| 426 | D | A | -2.4735 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.7006 | |
| 429 | K | A | -3.5171 | |
| 430 | Y | A | -2.6239 | |
| 431 | E | A | -2.7922 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0905 | |
| 435 | A | A | -1.7976 | |
| 436 | Y | A | -0.8839 | |
| 437 | L | A | -0.6033 | |
| 438 | N | A | -2.0278 | |
| 439 | R | A | -2.1031 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine