Project name: 7a3d284bfc9c982

Status: done

Started: 2026-02-12 08:46:41
Settings
Chain sequence(s) A: GGGHKGF
C: GGGHKGF
B: GGGHKGF
E: GGGHKGF
D: GGGHKGF
G: GGGHKGF
F: GGGHKGF
I: GGGHKGF
H: GGGHKGF
K: GGGHKGF
J: GGGHKGF
L: GGGHKGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-2.2718
Maximal score value
1.7386
Average score
-0.5511
Total score value
-46.29

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.0221
2 G A -1.3272
3 G A 0.0000
4 H A -1.9494
5 K A 0.0000
6 G A -0.2802
7 F A 0.5331
1 G B -0.8105
2 G B -1.2916
3 G B -1.5206
4 H B -2.2718
5 K B 0.0000
6 G B -0.2080
7 F B 0.7879
1 G C -0.7145
2 G C -1.1993
3 G C -1.3696
4 H C -2.1999
5 K C -1.4947
6 G C -0.1931
7 F C 1.5335
1 G D -0.4440
2 G D -0.9880
3 G D -1.0497
4 H D -1.7701
5 K D -0.9562
6 G D 0.2444
7 F D 1.6528
1 G E -0.9381
2 G E -1.2925
3 G E -1.3035
4 H E -1.6074
5 K E 0.0000
6 G E 0.1645
7 F E 1.0729
1 G F -0.9124
2 G F -1.1721
3 G F 0.0000
4 H F -1.4782
5 K F 0.0000
6 G F 0.0103
7 F F 0.8458
1 G G -0.8994
2 G G -1.0870
3 G G -0.9411
4 H G -1.0458
5 K G 0.0000
6 G G 0.0956
7 F G 0.8786
1 G H -0.7708
2 G H -1.0834
3 G H -1.1486
4 H H -1.5318
5 K H 0.0000
6 G H 0.1980
7 F H 1.0053
1 G I -0.7126
2 G I -1.1359
3 G I -1.5261
4 H I -2.0219
5 K I -1.3754
6 G I 0.1440
7 F I 1.7386
1 G J -0.6215
2 G J -0.9069
3 G J -1.1015
4 H J -1.6928
5 K J -0.8337
6 G J 0.4467
7 F J 1.6505
1 G K -1.0290
2 G K -1.2529
3 G K -1.1969
4 H K -1.4285
5 K K 0.0000
6 G K 0.3204
7 F K 1.0328
1 G L -0.9893
2 G L -1.2301
3 G L 0.0000
4 H L -1.7297
5 K L 0.0000
6 G L -0.1424
7 F L 0.5540
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Laboratory of Theory of Biopolymers 2018