| Chain sequence(s) |
A: PPINMANMAPPINMACMNPINMANMANPINMACM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.1887 | |
| 2 | P | A | 0.3272 | |
| 3 | I | A | 1.3285 | |
| 4 | N | A | -0.0719 | |
| 5 | M | A | 0.9234 | |
| 6 | A | A | 0.4784 | |
| 7 | N | A | -0.3558 | |
| 8 | M | A | 0.7512 | |
| 9 | A | A | 0.6480 | |
| 10 | P | A | 0.3806 | |
| 11 | P | A | 0.5518 | |
| 12 | I | A | 1.9036 | |
| 13 | N | A | 0.2548 | |
| 14 | M | A | 1.1435 | |
| 15 | A | A | 1.1049 | |
| 16 | C | A | 1.0088 | |
| 17 | M | A | 0.3908 | |
| 18 | N | A | -0.6960 | |
| 19 | P | A | 0.2778 | |
| 20 | I | A | 0.9131 | |
| 21 | N | A | -0.5241 | |
| 22 | M | A | 0.4822 | |
| 23 | A | A | 0.1193 | |
| 24 | N | A | -0.0460 | |
| 25 | M | A | 0.9170 | |
| 26 | A | A | 0.5677 | |
| 27 | N | A | 0.4161 | |
| 28 | P | A | 0.8553 | |
| 29 | I | A | 2.1811 | |
| 30 | N | A | 1.2666 | |
| 31 | M | A | 1.7890 | |
| 32 | A | A | 1.6347 | |
| 33 | C | A | 1.8784 | |
| 34 | M | A | 1.8400 |