| Chain sequence(s) |
A: SLFTFL
C: SLFTFL B: SLFTFL E: SLFTFL D: SLFTFL G: SLFTFL F: SLFTFL I: SLFTFL H: SLFTFL J: SLFTFL input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | E | 0.5234 | |
| 2 | L | E | 0.0000 | |
| 3 | F | E | 2.1422 | |
| 4 | T | E | 0.0000 | |
| 5 | F | E | 2.4379 | |
| 6 | L | E | 1.3731 | |
| 1 | S | C | 0.9469 | |
| 2 | L | C | 0.0000 | |
| 3 | F | C | 2.4267 | |
| 4 | T | C | 0.0000 | |
| 5 | F | C | 2.8385 | |
| 6 | L | C | 1.8000 | |
| 1 | S | A | 0.8419 | |
| 2 | L | A | 2.0775 | |
| 3 | F | A | 2.6262 | |
| 4 | T | A | 2.6483 | |
| 5 | F | A | 3.2768 | |
| 6 | L | A | 2.5347 | |
| 1 | S | B | 0.7727 | |
| 2 | L | B | 1.8472 | |
| 3 | F | B | 1.7649 | |
| 4 | T | B | 1.6160 | |
| 5 | F | B | 2.0774 | |
| 6 | L | B | 2.1927 | |
| 1 | S | D | 0.9659 | |
| 2 | L | D | 1.6984 | |
| 3 | F | D | 0.0000 | |
| 4 | T | D | 1.4800 | |
| 5 | F | D | 1.4631 | |
| 6 | L | D | 1.5567 | |
| 1 | S | I | 0.6734 | |
| 2 | L | I | 1.7576 | |
| 3 | F | I | 3.1662 | |
| 4 | T | I | 2.9050 | |
| 5 | F | I | 3.5424 | |
| 6 | L | I | 2.5554 | |
| 1 | S | G | 0.9465 | |
| 2 | L | G | 0.0000 | |
| 3 | F | G | 2.7123 | |
| 4 | T | G | 0.0000 | |
| 5 | F | G | 3.0557 | |
| 6 | L | G | 1.7047 | |
| 1 | S | F | 0.5440 | |
| 2 | L | F | 1.3940 | |
| 3 | F | F | 0.0000 | |
| 4 | T | F | 0.9189 | |
| 5 | F | F | 1.2438 | |
| 6 | L | F | 1.8033 | |
| 1 | S | H | 1.0161 | |
| 2 | L | H | 1.7873 | |
| 3 | F | H | 0.0000 | |
| 4 | T | H | 1.5308 | |
| 5 | F | H | 1.5601 | |
| 6 | L | H | 1.8464 | |
| 1 | S | J | 0.9172 | |
| 2 | L | J | 2.1084 | |
| 3 | F | J | 1.6415 | |
| 4 | T | J | 1.6089 | |
| 5 | F | J | 2.0710 | |
| 6 | L | J | 2.3052 |