| Chain sequence(s) |
L: KPLLPVDGKIKVEKID
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 274 | K | L | -1.7457 | |
| 275 | P | L | -0.3980 | |
| 276 | L | L | 1.1360 | |
| 277 | L | L | 1.6659 | |
| 278 | P | L | 0.3427 | |
| 279 | V | L | 1.4091 | |
| 280 | D | L | -1.5595 | |
| 281 | G | L | -1.1018 | |
| 282 | K | L | -1.4196 | |
| 283 | I | L | 1.3929 | |
| 284 | K | L | -0.9998 | |
| 285 | V | L | 1.1248 | |
| 286 | E | L | -1.8078 | |
| 287 | K | L | -1.6651 | |
| 288 | I | L | 1.3796 | |
| 289 | D | L | -1.4247 |