| Chain sequence(s) |
H: QVTLKESGPVLVKPTETLTLTCTVSGFSLTNYHVQWIRQPPGKALEWLGVMWSDGDTSFNSVLKSRLTISRDTSKSQVVLTMTNMDPVDTATYYCARDGTIAAMDYFDYWGQGTLVTVSS
L: DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYGASNLESGVPSRFSGSGSGTDFTLTISSLQPEDFANYYCQQANSFPWTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32)
[INFO] Main: Simulation completed successfully. (00:01:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.1606 | |
| 2 | V | H | -0.0885 | |
| 3 | T | H | -0.0248 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -1.7000 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2133 | |
| 8 | G | H | -0.5120 | |
| 9 | P | H | 0.1078 | |
| 11 | V | H | 1.8902 | |
| 12 | L | H | 1.0962 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.0964 | |
| 15 | P | H | -0.2996 | |
| 16 | T | H | -0.4611 | |
| 17 | E | H | -0.8636 | |
| 18 | T | H | -0.2057 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.0409 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | 0.0568 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -0.0641 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.2606 | |
| 27 | G | H | -0.4277 | |
| 28 | F | H | 0.1186 | |
| 29 | S | H | -0.0862 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.3031 | |
| 36 | N | H | -1.2040 | |
| 37 | Y | H | 0.1955 | |
| 38 | H | H | -0.0769 | |
| 39 | V | H | 0.0000 | |
| 40 | Q | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.1249 | |
| 45 | P | H | 0.0000 | |
| 46 | P | H | -0.3388 | |
| 47 | G | H | -0.8120 | |
| 48 | K | H | -1.7795 | |
| 49 | A | H | -0.2956 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.4101 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | M | H | 0.0000 | |
| 57 | W | H | 0.1556 | |
| 58 | S | H | -0.3519 | |
| 59 | D | H | -1.8669 | |
| 63 | G | H | -1.0191 | |
| 64 | D | H | -1.8063 | |
| 65 | T | H | -0.3257 | |
| 66 | S | H | 0.0000 | |
| 67 | F | H | 0.2044 | |
| 68 | N | H | 0.0000 | |
| 69 | S | H | 0.1041 | |
| 70 | V | H | 1.7347 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.7376 | |
| 74 | S | H | -0.5766 | |
| 75 | R | H | -0.4006 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -0.0635 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2443 | |
| 80 | R | H | -0.5383 | |
| 81 | D | H | -0.6131 | |
| 82 | T | H | -0.1859 | |
| 83 | S | H | -0.5247 | |
| 84 | K | H | -1.7497 | |
| 85 | S | H | -0.4227 | |
| 86 | Q | H | -0.2842 | |
| 87 | V | H | 0.0000 | |
| 88 | V | H | 0.5502 | |
| 89 | L | H | 0.0000 | |
| 90 | T | H | -0.0216 | |
| 91 | M | H | 0.0000 | |
| 92 | T | H | -0.2969 | |
| 93 | N | H | -1.2893 | |
| 94 | M | H | 0.0000 | |
| 95 | D | H | -1.2100 | |
| 96 | P | H | -0.1373 | |
| 97 | V | H | 1.7301 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.0158 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | 0.0962 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | T | H | 0.3236 | |
| 110 | I | H | 2.0135 | |
| 111 | A | H | 0.4475 | |
| 112A | A | H | 0.0688 | |
| 112 | M | H | 0.0000 | |
| 113 | D | H | -0.2728 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.4246 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0603 | |
| 121 | G | H | -0.2961 | |
| 122 | T | H | 0.1018 | |
| 123 | L | H | 0.7050 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0624 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.2430 | |
| 128 | S | H | -0.3364 | |
| 1 | D | L | -1.7894 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.1983 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.0709 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.2176 | |
| 8 | P | L | -0.2689 | |
| 9 | S | L | -0.2666 | |
| 10 | S | L | -0.2447 | |
| 11 | V | L | 0.2013 | |
| 12 | S | L | -0.2674 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.0162 | |
| 15 | V | L | 1.3076 | |
| 16 | G | L | -0.2300 | |
| 17 | D | L | -1.0055 | |
| 18 | R | L | -1.9703 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.0512 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.0260 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.6479 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.3641 | |
| 27 | Q | L | -0.9618 | |
| 28 | G | L | -0.5889 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.2230 | |
| 37 | S | L | -0.0053 | |
| 38 | W | L | 0.5149 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.1582 | |
| 44 | Q | L | -0.2596 | |
| 45 | K | L | -0.6959 | |
| 46 | P | L | -0.4511 | |
| 47 | G | L | -0.7998 | |
| 48 | K | L | -1.7118 | |
| 49 | A | L | -0.2956 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8070 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.3011 | |
| 56 | G | L | 0.0000 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.3590 | |
| 66 | N | L | -0.7371 | |
| 67 | L | L | 0.3941 | |
| 68 | E | L | -0.1442 | |
| 69 | S | L | -0.3354 | |
| 70 | G | L | -0.4729 | |
| 71 | V | L | 0.0731 | |
| 72 | P | L | -0.1401 | |
| 74 | S | L | -0.2877 | |
| 75 | R | L | -0.3197 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.1960 | |
| 78 | G | L | -0.1543 | |
| 79 | S | L | -0.2578 | |
| 80 | G | L | -0.2756 | |
| 83 | S | L | -0.2798 | |
| 84 | G | L | -0.2881 | |
| 85 | T | L | -0.2662 | |
| 86 | D | L | -1.0751 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.0184 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.0191 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -0.2774 | |
| 93 | S | L | -0.3565 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.4546 | |
| 96 | P | L | -0.6482 | |
| 97 | E | L | -1.8283 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | 1.2465 | |
| 100 | A | L | 0.0000 | |
| 101 | N | L | -0.4015 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | N | L | -0.4508 | |
| 109 | S | L | 0.1837 | |
| 114 | F | L | 1.8290 | |
| 115 | P | L | 0.0000 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.0124 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.7117 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.0284 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -0.7497 | |
| 126 | I | L | 0.4006 | |
| 127 | K | L | -1.5503 |