Project name: 35r3

Status: done

Started: 2025-02-26 01:00:05
Settings
Chain sequence(s) A: FSRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAGFAVTNDGVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:01)
Show buried residues

Minimal score value
-3.1308
Maximal score value
2.4721
Average score
-0.486
Total score value
-142.8978

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.4531
2 S A -0.1206
3 R A -1.6841
4 P A -1.0743
5 G A -0.9671
6 L A -0.5618
7 P A -0.1581
8 V A 0.0989
9 E A -0.2591
10 Y A 0.4426
11 L A 0.0000
12 Q A -2.0005
13 V A 0.0000
14 P A -1.5216
15 S A 0.0000
16 P A -0.9473
17 S A -0.6761
18 M A 0.0000
19 G A -1.2725
20 R A -1.8922
21 D A -2.5193
22 I A 0.0000
23 K A -2.1646
24 V A 0.0000
25 Q A 0.0000
26 F A 0.0000
27 Q A 0.0000
28 S A -0.9248
29 G A -1.1095
30 G A -1.6145
31 N A -2.3438
32 N A -2.4712
33 S A 0.0000
34 P A -1.0249
35 A A 0.0000
36 V A 0.0000
37 Y A 0.0000
38 L A 0.0000
39 L A 0.0000
40 D A 0.0000
41 G A 0.0000
42 L A -0.9752
43 R A -2.3934
44 A A 0.0000
45 Q A -2.3970
46 D A -3.1308
47 D A -2.3671
48 Y A -0.5501
49 N A 0.0000
50 G A 0.0000
51 W A 0.0000
52 D A 0.0000
53 I A 0.8921
54 N A -0.0800
55 T A 0.0000
56 P A -0.0283
57 A A 0.0000
58 F A 0.0000
59 E A -0.3915
60 W A -0.1239
61 Y A 0.0000
62 Y A 0.0668
63 Q A -1.0542
64 S A 0.0000
65 G A -0.7971
66 L A 0.0000
67 S A 0.0000
68 I A 0.0000
69 V A 0.0000
70 M A 0.0000
71 P A 0.0000
72 V A 0.0000
73 G A 0.0000
74 G A 0.0000
75 Q A -1.2723
76 S A 0.0000
77 S A 0.0000
78 F A 0.0000
79 Y A 0.0000
80 S A 0.0000
81 D A -0.5701
82 W A 0.0000
83 Y A 0.9599
84 S A 0.1181
85 P A -0.0818
86 A A 0.0000
87 C A -0.3946
88 G A -1.3745
89 K A -1.8953
90 A A -0.8112
91 G A -0.4693
92 C A 0.1783
93 Q A -0.3546
94 T A -0.3607
95 Y A 0.0000
96 K A -0.8078
97 W A 0.0000
98 E A -0.5589
99 T A -0.5048
100 F A 0.0000
101 L A 0.0000
102 T A -0.3631
103 S A -0.5238
104 E A -0.6779
105 L A 0.0000
106 P A 0.0000
107 Q A -1.5465
108 W A -0.8515
109 L A 0.0000
110 S A -1.5108
111 A A -0.9496
112 N A -1.2796
113 R A -1.7189
114 A A -1.8254
115 V A 0.0000
116 K A -1.9562
117 P A -1.2727
118 T A -0.8703
119 G A -0.5186
120 S A 0.0000
121 A A 0.0000
122 A A 0.0000
123 I A 0.0000
124 G A 0.0000
125 L A 0.0000
126 S A 0.0262
127 M A 0.0000
128 A A 0.0000
129 G A 0.0000
130 S A 0.0000
131 S A 0.0000
132 A A 0.0000
133 M A 0.0000
134 I A 0.0000
135 L A 0.0000
136 A A 0.0000
137 A A 0.0000
138 Y A -0.2296
139 H A -0.4040
140 P A -0.9293
141 Q A -1.2090
142 Q A 0.0000
143 F A 0.0000
144 I A -0.1103
145 Y A 0.0000
146 A A 0.0000
147 G A 0.0000
148 S A 0.0000
149 L A 0.0000
150 S A 0.0000
151 A A 0.0000
152 L A 0.0379
153 L A 0.0000
154 D A -1.2987
155 P A 0.0000
156 S A -1.6079
157 Q A -1.7110
158 G A -0.6566
159 M A 0.3749
160 G A 0.0000
161 P A -0.0913
162 S A 0.3201
163 L A 0.8775
164 I A 0.0000
165 G A -0.0588
166 L A 0.7106
167 A A -0.2979
168 M A 0.0000
169 G A -1.2465
170 D A -2.0464
171 A A 0.0000
172 G A 0.0000
173 G A -1.5548
174 Y A 0.0000
175 K A -1.8122
176 A A -0.7256
177 A A -0.6660
178 D A -0.4785
179 M A 0.0000
180 W A 0.0000
181 G A 0.0000
182 P A -0.6271
183 S A -1.0332
184 S A -0.9036
185 D A -1.1462
186 P A -1.2880
187 A A 0.0000
188 W A 0.0000
189 E A -2.7701
190 R A -1.6775
191 N A 0.0000
192 D A 0.0000
193 P A 0.0000
194 T A -1.6025
195 Q A -2.1026
196 Q A 0.0000
197 I A 0.0000
198 P A -1.1020
199 K A -1.4172
200 L A 0.0000
201 V A -1.2639
202 A A -0.9629
203 N A -1.4363
204 N A -1.7873
205 T A 0.0000
206 R A -0.6858
207 L A 0.0000
208 W A 0.0000
209 V A 0.0000
210 Y A 0.0000
211 C A 0.0000
212 G A 0.0000
213 N A -1.0852
214 G A 0.0000
215 T A -1.4697
216 P A -1.7002
217 N A -2.2667
218 E A -2.1765
219 L A -1.2329
220 G A -1.2980
221 G A -0.9861
222 A A -0.7726
223 N A -0.9751
224 I A 0.4673
225 P A -0.2255
226 A A -0.5914
227 E A -1.0085
228 F A 0.4390
229 L A 0.4216
230 E A 0.0000
231 N A -1.1942
232 F A 0.0126
233 V A 0.0000
234 R A -0.6203
235 S A -0.7724
236 S A 0.0000
237 N A 0.0000
238 L A -0.7630
239 K A -2.2578
240 F A 0.0000
241 Q A -1.7113
242 D A -2.7424
243 A A -1.9321
244 Y A 0.0000
245 N A -2.4679
246 A A -1.3430
247 A A -0.9861
248 G A -1.0970
249 G A 0.0000
250 H A -1.6598
251 N A -1.2311
252 A A -0.5572
253 V A 0.2507
254 F A 0.5010
255 N A 0.0705
256 F A 0.0696
257 P A -0.3639
258 P A -0.8028
259 N A -1.1958
260 G A 0.0000
261 T A 0.0000
262 H A -0.7708
263 S A -0.6671
264 W A -0.7553
265 E A -1.6589
266 Y A -0.7552
267 W A 0.0000
268 G A 0.0000
269 A A -0.6418
270 Q A -0.6143
271 L A 0.0000
272 N A -0.8816
273 A A -0.6152
274 M A 0.0000
275 K A -1.0250
276 G A -1.0956
277 D A -0.8394
278 L A 0.0000
279 Q A -0.7502
280 S A -0.6232
281 S A -0.4744
282 L A -0.3706
283 G A -0.3581
284 A A 0.0000
285 G A 0.3064
286 F A 2.1773
287 A A 1.5227
288 V A 1.5710
289 T A -0.0862
290 N A -1.5412
291 D A -1.5427
292 G A -0.2403
293 V A 1.9149
294 I A 2.4721
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Laboratory of Theory of Biopolymers 2018