| Chain sequence(s) |
A: CPVLLKSTETGQYLRINPDGTVDGTRDRSDPHIQFQISPEGNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.7269 | |
| 2 | P | A | 0.3156 | |
| 3 | V | A | 0.9573 | |
| 4 | L | A | 0.1345 | |
| 5 | L | A | 0.0524 | |
| 6 | K | A | -1.8042 | |
| 7 | S | A | -1.4538 | |
| 8 | T | A | -1.5021 | |
| 9 | E | A | -2.2132 | |
| 10 | T | A | -1.6651 | |
| 11 | G | A | -1.6193 | |
| 12 | Q | A | -2.3950 | |
| 13 | Y | A | 0.0000 | |
| 14 | L | A | -0.0837 | |
| 15 | R | A | -0.5275 | |
| 16 | I | A | 0.2477 | |
| 17 | N | A | -0.6743 | |
| 18 | P | A | -1.1716 | |
| 19 | D | A | -1.9022 | |
| 20 | G | A | -1.0530 | |
| 21 | T | A | -0.1301 | |
| 22 | V | A | 1.1182 | |
| 23 | D | A | -0.0420 | |
| 24 | G | A | -0.9742 | |
| 25 | T | A | -2.3332 | |
| 26 | R | A | -3.5317 | |
| 27 | D | A | -3.6005 | |
| 28 | R | A | -3.4611 | |
| 29 | S | A | -2.1749 | |
| 30 | D | A | -2.0962 | |
| 31 | P | A | -1.3656 | |
| 32 | H | A | -1.0213 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.8821 | |
| 35 | F | A | 0.1886 | |
| 36 | Q | A | -0.0366 | |
| 37 | I | A | 1.2290 | |
| 38 | S | A | -0.1611 | |
| 39 | P | A | -1.1948 | |
| 40 | E | A | -2.3060 | |
| 41 | G | A | -2.1643 | |
| 42 | N | A | -2.1511 | |
| 43 | G | A | -1.4825 |