| Chain sequence(s) |
A: KGHKGHG
C: KGHKGHG B: KGHKGHG E: KGHKGHG D: KGHKGHG G: KGHKGHG F: KGHKGHG I: KGHKGHG H: KGHKGHG K: KGHKGHG J: KGHKGHG M: KGHKGHG L: KGHKGHG O: KGHKGHG N: KGHKGHG Q: KGHKGHG P: KGHKGHG S: KGHKGHG R: KGHKGHG T: KGHKGHG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:57)
[INFO] Main: Simulation completed successfully. (00:07:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.1942 | |
| 2 | G | A | -2.5826 | |
| 3 | H | A | -2.7314 | |
| 4 | K | A | -2.9300 | |
| 5 | G | A | -2.8346 | |
| 6 | H | A | -2.1285 | |
| 7 | G | A | -1.6190 | |
| 1 | K | B | -3.2865 | |
| 2 | G | B | -2.9323 | |
| 3 | H | B | -3.3791 | |
| 4 | K | B | -3.3234 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | 0.0000 | |
| 7 | G | B | 0.0000 | |
| 1 | K | C | -3.1441 | |
| 2 | G | C | -3.0098 | |
| 3 | H | C | -3.2384 | |
| 4 | K | C | -3.2899 | |
| 5 | G | C | -2.8311 | |
| 6 | H | C | -2.4864 | |
| 7 | G | C | 0.0000 | |
| 1 | K | D | -3.5506 | |
| 2 | G | D | -3.3905 | |
| 3 | H | D | -3.4777 | |
| 4 | K | D | 0.0000 | |
| 5 | G | D | -2.8494 | |
| 6 | H | D | -1.9587 | |
| 7 | G | D | 0.0000 | |
| 1 | K | E | -2.5256 | |
| 2 | G | E | -2.7571 | |
| 3 | H | E | -2.9442 | |
| 4 | K | E | -3.9798 | |
| 5 | G | E | 0.0000 | |
| 6 | H | E | -2.4460 | |
| 7 | G | E | -2.1010 | |
| 1 | K | F | -2.8416 | |
| 2 | G | F | -3.0499 | |
| 3 | H | F | 0.0000 | |
| 4 | K | F | -3.3539 | |
| 5 | G | F | -2.6713 | |
| 6 | H | F | -2.3369 | |
| 7 | G | F | -1.5797 | |
| 1 | K | G | -2.4090 | |
| 2 | G | G | -2.8152 | |
| 3 | H | G | -3.0264 | |
| 4 | K | G | -3.4198 | |
| 5 | G | G | -2.9033 | |
| 6 | H | G | -2.7644 | |
| 7 | G | G | 0.0000 | |
| 1 | K | H | -2.8460 | |
| 2 | G | H | -3.0657 | |
| 3 | H | H | -3.6011 | |
| 4 | K | H | -3.9452 | |
| 5 | G | H | -3.2630 | |
| 6 | H | H | -2.8503 | |
| 7 | G | H | -2.3333 | |
| 1 | K | I | -3.2882 | |
| 2 | G | I | -3.3043 | |
| 3 | H | I | -3.5434 | |
| 4 | K | I | -3.9505 | |
| 5 | G | I | -3.3620 | |
| 6 | H | I | -2.5051 | |
| 7 | G | I | 0.0000 | |
| 1 | K | J | -2.2853 | |
| 2 | G | J | -2.7395 | |
| 3 | H | J | -3.1200 | |
| 4 | K | J | -3.1415 | |
| 5 | G | J | -2.7073 | |
| 6 | H | J | -2.3911 | |
| 7 | G | J | 0.0000 | |
| 1 | K | K | -2.4833 | |
| 2 | G | K | -2.0451 | |
| 3 | H | K | -2.4784 | |
| 4 | K | K | -3.1821 | |
| 5 | G | K | -2.4240 | |
| 6 | H | K | -2.2336 | |
| 7 | G | K | -1.9399 | |
| 1 | K | L | -2.4225 | |
| 2 | G | L | -2.4823 | |
| 3 | H | L | -2.6954 | |
| 4 | K | L | -2.4907 | |
| 5 | G | L | -2.0364 | |
| 6 | H | L | -1.9869 | |
| 7 | G | L | -2.1389 | |
| 1 | K | M | -2.7638 | |
| 2 | G | M | -2.5704 | |
| 3 | H | M | -2.6125 | |
| 4 | K | M | -2.8842 | |
| 5 | G | M | 0.0000 | |
| 6 | H | M | -2.4622 | |
| 7 | G | M | 0.0000 | |
| 1 | K | N | -2.9451 | |
| 2 | G | N | -3.3980 | |
| 3 | H | N | -3.5438 | |
| 4 | K | N | -3.8970 | |
| 5 | G | N | 0.0000 | |
| 6 | H | N | -2.2163 | |
| 7 | G | N | -2.3471 | |
| 1 | K | O | -2.6282 | |
| 2 | G | O | -2.7345 | |
| 3 | H | O | -2.7217 | |
| 4 | K | O | -3.1584 | |
| 5 | G | O | -2.4399 | |
| 6 | H | O | -2.5625 | |
| 7 | G | O | -2.3348 | |
| 1 | K | P | -2.7501 | |
| 2 | G | P | -3.2272 | |
| 3 | H | P | -3.4787 | |
| 4 | K | P | -3.3478 | |
| 5 | G | P | 0.0000 | |
| 6 | H | P | -2.3784 | |
| 7 | G | P | 0.0000 | |
| 1 | K | Q | -2.9104 | |
| 2 | G | Q | -3.2109 | |
| 3 | H | Q | -3.6517 | |
| 4 | K | Q | -3.4488 | |
| 5 | G | Q | -2.5004 | |
| 6 | H | Q | 0.0000 | |
| 7 | G | Q | -1.3320 | |
| 1 | K | R | -2.3296 | |
| 2 | G | R | -2.9720 | |
| 3 | H | R | -3.0530 | |
| 4 | K | R | -3.4013 | |
| 5 | G | R | 0.0000 | |
| 6 | H | R | 0.0000 | |
| 7 | G | R | -1.5767 | |
| 1 | K | S | -3.1070 | |
| 2 | G | S | -3.1172 | |
| 3 | H | S | -2.8751 | |
| 4 | K | S | -2.9898 | |
| 5 | G | S | -2.5920 | |
| 6 | H | S | -2.2071 | |
| 7 | G | S | 0.0000 | |
| 1 | K | T | -2.7284 | |
| 2 | G | T | -3.1920 | |
| 3 | H | T | -3.0201 | |
| 4 | K | T | -3.2644 | |
| 5 | G | T | 0.0000 | |
| 6 | H | T | -2.2107 | |
| 7 | G | T | -1.5707 |