| Chain sequence(s) |
A: EVQLQASGGGLVQAGGSLRLSCTASLRAFSTYTMGWFRQAPGKEREFVAASNWRGTDFHDSVKGRFIISRDNTKKTVDLQMNSLKPEDTAIYYCAADGSTWLKRSDYSYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:05)
[INFO] Main: Simulation completed successfully. (00:04:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9410 | |
| 2 | V | A | -1.1950 | |
| 3 | Q | A | -1.6503 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7744 | |
| 6 | A | A | -1.3126 | |
| 7 | S | A | -1.3473 | |
| 8 | G | A | -1.0643 | |
| 9 | G | A | -0.7899 | |
| 10 | G | A | -0.0538 | |
| 11 | L | A | 1.0515 | |
| 12 | V | A | 0.0734 | |
| 13 | Q | A | -1.1604 | |
| 14 | A | A | -1.3269 | |
| 15 | G | A | -1.2399 | |
| 16 | G | A | -0.8030 | |
| 17 | S | A | -1.0798 | |
| 18 | L | A | -0.9154 | |
| 19 | R | A | -1.9488 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -1.1327 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -1.2604 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.6341 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -1.9104 | |
| 28 | A | A | -1.1300 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.5703 | |
| 31 | T | A | -0.2179 | |
| 32 | Y | A | 0.1001 | |
| 33 | T | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.3570 | |
| 39 | Q | A | -2.0554 | |
| 40 | A | A | -1.9519 | |
| 41 | P | A | -1.3742 | |
| 42 | G | A | -1.9345 | |
| 43 | K | A | -3.3393 | |
| 44 | E | A | -3.5491 | |
| 45 | R | A | -2.7649 | |
| 46 | E | A | -2.4240 | |
| 47 | F | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | N | A | 0.0000 | |
| 53 | W | A | 0.2832 | |
| 54 | R | A | -1.1206 | |
| 55 | G | A | -0.6131 | |
| 56 | T | A | -0.2148 | |
| 57 | D | A | -0.8314 | |
| 58 | F | A | -0.9998 | |
| 59 | H | A | -1.8285 | |
| 60 | D | A | -2.5327 | |
| 61 | S | A | -1.7885 | |
| 62 | V | A | 0.0000 | |
| 63 | K | A | -2.4181 | |
| 64 | G | A | -1.4392 | |
| 65 | R | A | -0.8759 | |
| 66 | F | A | 0.0000 | |
| 67 | I | A | 0.7788 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | -0.2209 | |
| 70 | R | A | -1.1568 | |
| 71 | D | A | -1.7880 | |
| 72 | N | A | -1.7466 | |
| 73 | T | A | -1.6326 | |
| 74 | K | A | -2.4245 | |
| 75 | K | A | -2.1482 | |
| 76 | T | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | D | A | -0.8552 | |
| 79 | L | A | 0.0000 | |
| 80 | Q | A | -0.5253 | |
| 81 | M | A | 0.0000 | |
| 82 | N | A | -0.8674 | |
| 83 | S | A | -1.0607 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -2.0837 | |
| 86 | P | A | -1.8513 | |
| 87 | E | A | -2.2952 | |
| 88 | D | A | 0.0000 | |
| 89 | T | A | -0.8857 | |
| 90 | A | A | 0.0000 | |
| 91 | I | A | -0.4043 | |
| 92 | Y | A | 0.0000 | |
| 93 | Y | A | -0.6081 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | D | A | 0.0000 | |
| 98 | G | A | -0.2975 | |
| 99 | S | A | 0.0426 | |
| 100 | T | A | 0.2967 | |
| 101 | W | A | 0.7315 | |
| 102 | L | A | -0.0007 | |
| 103 | K | A | -1.5189 | |
| 104 | R | A | -2.3826 | |
| 105 | S | A | -2.2723 | |
| 106 | D | A | -2.3578 | |
| 107 | Y | A | 0.0000 | |
| 108 | S | A | -0.4149 | |
| 109 | Y | A | 0.1725 | |
| 110 | W | A | 0.0982 | |
| 111 | G | A | -0.8584 | |
| 112 | Q | A | -1.4668 | |
| 113 | G | A | -0.9964 | |
| 114 | T | A | -1.0787 | |
| 115 | Q | A | -0.9795 | |
| 116 | V | A | 0.0000 | |
| 117 | T | A | -0.2265 | |
| 118 | V | A | 0.0000 | |
| 119 | S | A | -0.7164 |