| Chain sequence(s) |
A: MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:27)
[INFO] Main: Simulation completed successfully. (00:04:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2735 | |
| 2 | A | A | -1.1533 | |
| 3 | T | A | -0.8561 | |
| 4 | K | A | -0.6696 | |
| 5 | A | A | 0.0000 | |
| 6 | V | A | 1.1242 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 0.8306 | |
| 9 | L | A | 0.0000 | |
| 10 | K | A | -2.2131 | |
| 11 | G | A | -2.2849 | |
| 12 | D | A | -2.5757 | |
| 13 | G | A | -1.7651 | |
| 14 | P | A | -1.7095 | |
| 15 | V | A | 0.0000 | |
| 16 | Q | A | -2.2905 | |
| 17 | G | A | 0.0000 | |
| 18 | I | A | 0.9295 | |
| 19 | I | A | 0.0000 | |
| 20 | N | A | 0.1352 | |
| 21 | F | A | 0.0000 | |
| 22 | E | A | -2.0739 | |
| 23 | Q | A | 0.0000 | |
| 24 | K | A | -2.9606 | |
| 25 | E | A | -3.0589 | |
| 26 | S | A | -2.0661 | |
| 27 | N | A | -2.2588 | |
| 28 | G | A | -2.0038 | |
| 29 | P | A | -1.7914 | |
| 30 | V | A | 0.0000 | |
| 31 | K | A | -2.2508 | |
| 32 | V | A | 0.0000 | |
| 33 | W | A | -0.5813 | |
| 34 | G | A | -0.1398 | |
| 35 | S | A | -1.0039 | |
| 36 | I | A | 0.0000 | |
| 37 | K | A | -2.7347 | |
| 38 | G | A | -1.9126 | |
| 39 | L | A | 0.0000 | |
| 40 | T | A | -2.2247 | |
| 41 | E | A | -3.1597 | |
| 42 | G | A | -1.3218 | |
| 43 | L | A | -0.1463 | |
| 44 | H | A | 0.0000 | |
| 45 | G | A | 0.0000 | |
| 46 | F | A | 0.0000 | |
| 47 | H | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | H | A | 0.0000 | |
| 50 | E | A | -0.2081 | |
| 51 | F | A | 0.6396 | |
| 52 | G | A | -0.1044 | |
| 53 | D | A | -0.7704 | |
| 54 | N | A | -0.8247 | |
| 55 | T | A | -0.6875 | |
| 56 | A | A | -0.4602 | |
| 57 | G | A | -1.2399 | |
| 58 | C | A | -0.8018 | |
| 59 | T | A | -0.4083 | |
| 60 | S | A | -0.4419 | |
| 61 | A | A | 0.0000 | |
| 62 | G | A | -0.1895 | |
| 63 | P | A | -0.4984 | |
| 64 | H | A | 0.0000 | |
| 65 | F | A | 0.0000 | |
| 66 | N | A | -0.8603 | |
| 67 | P | A | -0.6400 | |
| 68 | L | A | -0.5653 | |
| 69 | S | A | -1.0696 | |
| 70 | R | A | -2.6447 | |
| 71 | K | A | -3.1832 | |
| 72 | H | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | P | A | -1.7345 | |
| 76 | K | A | -2.7330 | |
| 77 | D | A | -3.0884 | |
| 78 | E | A | -3.6235 | |
| 79 | E | A | -3.5931 | |
| 80 | R | A | 0.0000 | |
| 81 | H | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | G | A | 0.0000 | |
| 84 | D | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | N | A | -0.1336 | |
| 88 | V | A | 0.0000 | |
| 89 | T | A | -0.7858 | |
| 90 | A | A | 0.0000 | |
| 91 | D | A | -3.8717 | |
| 92 | K | A | -3.9126 | |
| 93 | D | A | -3.7149 | |
| 94 | G | A | 0.0000 | |
| 95 | V | A | -2.8924 | |
| 96 | A | A | 0.0000 | |
| 97 | D | A | -2.2219 | |
| 98 | V | A | 0.0000 | |
| 99 | S | A | -1.0054 | |
| 100 | I | A | -1.1231 | |
| 101 | E | A | -2.1804 | |
| 102 | D | A | 0.0000 | |
| 103 | S | A | -0.9505 | |
| 104 | V | A | -0.3922 | |
| 105 | I | A | 0.0000 | |
| 106 | S | A | -0.9558 | |
| 107 | L | A | 0.0000 | |
| 108 | S | A | -0.9976 | |
| 109 | G | A | -1.5015 | |
| 110 | D | A | -2.0336 | |
| 111 | H | A | -0.9467 | |
| 112 | C | A | -0.6103 | |
| 113 | I | A | 0.0000 | |
| 114 | I | A | 0.7767 | |
| 115 | G | A | 0.2860 | |
| 116 | R | A | 0.0416 | |
| 117 | T | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | H | A | 0.0000 | |
| 122 | E | A | -1.8575 | |
| 123 | K | A | -1.7815 | |
| 124 | A | A | -0.6574 | |
| 125 | D | A | 0.0000 | |
| 126 | D | A | -1.2126 | |
| 127 | L | A | -1.1867 | |
| 128 | G | A | -2.5897 | |
| 129 | K | A | -2.3165 | |
| 130 | G | A | -2.3787 | |
| 131 | G | A | -2.2679 | |
| 132 | N | A | -3.0048 | |
| 133 | E | A | -3.4097 | |
| 134 | E | A | -3.1975 | |
| 135 | S | A | 0.0000 | |
| 136 | T | A | -3.3061 | |
| 137 | K | A | -3.2440 | |
| 138 | T | A | -1.8416 | |
| 139 | G | A | 0.0000 | |
| 140 | N | A | -2.0728 | |
| 141 | A | A | 0.0000 | |
| 142 | G | A | -1.3534 | |
| 143 | S | A | -1.2151 | |
| 144 | R | A | -1.2564 | |
| 145 | L | A | -1.4436 | |
| 146 | A | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | G | A | 0.0000 | |
| 149 | V | A | 0.9388 | |
| 150 | I | A | 0.0000 | |
| 151 | G | A | 1.1446 | |
| 152 | I | A | 1.7970 | |
| 153 | A | A | 0.1949 | |
| 154 | Q | A | -0.8260 |