| Chain sequence(s) |
A: SVAEELIKFFRELSEKSKDPDAADMYRFAAMQVELLTRESEDPLAELKEFLDFFIPYLQRHGWISEEEKKKLLELKAKL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:20)
[INFO] Main: Simulation completed successfully. (00:04:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.0672 | |
| 2 | V | A | -1.2220 | |
| 3 | A | A | -1.5572 | |
| 4 | E | A | -2.8397 | |
| 5 | E | A | -2.4696 | |
| 6 | L | A | 0.0000 | |
| 7 | I | A | -2.6118 | |
| 8 | K | A | -3.3960 | |
| 9 | F | A | -2.6576 | |
| 10 | F | A | 0.0000 | |
| 11 | R | A | -4.3310 | |
| 12 | E | A | -4.3506 | |
| 13 | L | A | 0.0000 | |
| 14 | S | A | 0.0000 | |
| 15 | E | A | -4.4251 | |
| 16 | K | A | -3.8484 | |
| 17 | S | A | -3.4550 | |
| 18 | K | A | -3.1434 | |
| 19 | D | A | -2.9123 | |
| 20 | P | A | -2.4852 | |
| 21 | D | A | -2.9848 | |
| 22 | A | A | 0.0000 | |
| 23 | A | A | -3.5361 | |
| 24 | D | A | -3.1567 | |
| 25 | M | A | -1.4264 | |
| 26 | Y | A | 0.0000 | |
| 27 | R | A | -2.8438 | |
| 28 | F | A | -0.7640 | |
| 29 | A | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | M | A | -0.1178 | |
| 32 | Q | A | -0.3522 | |
| 33 | V | A | 0.0000 | |
| 34 | E | A | -1.8276 | |
| 35 | L | A | -1.1830 | |
| 36 | L | A | -1.8098 | |
| 37 | T | A | -2.3247 | |
| 38 | R | A | -3.1672 | |
| 39 | E | A | -3.4211 | |
| 40 | S | A | -2.8177 | |
| 41 | E | A | -3.3484 | |
| 42 | D | A | -2.8319 | |
| 43 | P | A | -2.0869 | |
| 44 | L | A | -0.2519 | |
| 45 | A | A | -1.2705 | |
| 46 | E | A | -2.3629 | |
| 47 | L | A | 0.0000 | |
| 48 | K | A | -1.6890 | |
| 49 | E | A | -2.5019 | |
| 50 | F | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | D | A | -1.6841 | |
| 53 | F | A | 0.6146 | |
| 54 | F | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | P | A | -0.6416 | |
| 57 | Y | A | -0.5081 | |
| 58 | L | A | 0.0000 | |
| 59 | Q | A | -2.0525 | |
| 60 | R | A | -2.5189 | |
| 61 | H | A | -2.0231 | |
| 62 | G | A | -1.7299 | |
| 63 | W | A | -1.2314 | |
| 64 | I | A | 0.0000 | |
| 65 | S | A | -2.2781 | |
| 66 | E | A | -3.6991 | |
| 67 | E | A | -3.7551 | |
| 68 | E | A | -2.9533 | |
| 69 | K | A | -3.1016 | |
| 70 | K | A | -3.8603 | |
| 71 | K | A | -3.2194 | |
| 72 | L | A | 0.0000 | |
| 73 | L | A | -1.8412 | |
| 74 | E | A | -2.7488 | |
| 75 | L | A | 0.0000 | |
| 76 | K | A | -1.7135 | |
| 77 | A | A | -1.2878 | |
| 78 | K | A | -1.7148 | |
| 79 | L | A | -0.4342 |