| Chain sequence(s) |
A: MTYKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6354 | |
| 2 | T | A | -0.5690 | |
| 3 | Y | A | 0.0000 | |
| 4 | K | A | -1.7966 | |
| 5 | L | A | 0.0000 | |
| 6 | I | A | -1.1132 | |
| 7 | L | A | 0.0000 | |
| 8 | N | A | -1.8715 | |
| 9 | G | A | -2.5398 | |
| 10 | K | A | -2.4413 | |
| 11 | T | A | -1.2565 | |
| 12 | L | A | -1.3013 | |
| 13 | K | A | -2.3569 | |
| 14 | G | A | -1.6787 | |
| 15 | E | A | -2.3488 | |
| 16 | T | A | -1.0677 | |
| 17 | T | A | -1.2071 | |
| 18 | T | A | 0.0000 | |
| 19 | E | A | -1.3795 | |
| 20 | A | A | 0.0000 | |
| 21 | V | A | 1.1195 | |
| 22 | D | A | -0.4211 | |
| 23 | A | A | -0.8018 | |
| 24 | A | A | -0.7777 | |
| 25 | T | A | -1.1179 | |
| 26 | A | A | 0.0000 | |
| 27 | E | A | -2.3304 | |
| 28 | K | A | -2.5182 | |
| 29 | V | A | -1.4486 | |
| 30 | F | A | 0.0000 | |
| 31 | K | A | -2.7968 | |
| 32 | Q | A | -2.4192 | |
| 33 | Y | A | -1.2898 | |
| 34 | A | A | 0.0000 | |
| 35 | N | A | -3.3268 | |
| 36 | D | A | -3.1393 | |
| 37 | N | A | -3.1071 | |
| 38 | G | A | -2.7743 | |
| 39 | V | A | 0.0000 | |
| 40 | D | A | -3.7529 | |
| 41 | G | A | -3.0184 | |
| 42 | E | A | -2.8715 | |
| 43 | W | A | -1.6018 | |
| 44 | T | A | -0.6996 | |
| 45 | Y | A | -0.9758 | |
| 46 | D | A | -2.0491 | |
| 47 | D | A | -2.5330 | |
| 48 | A | A | -1.4255 | |
| 49 | T | A | -1.4637 | |
| 50 | K | A | -2.0719 | |
| 51 | T | A | -1.7393 | |
| 52 | F | A | 0.0000 | |
| 53 | T | A | -0.7657 | |
| 54 | V | A | 0.0000 | |
| 55 | T | A | -2.4441 | |
| 56 | E | A | -3.5392 |